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scnpilot_solids2_trim150_scaffold_1953_14

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 12445..12612

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VM38_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 52.0
  • Bit_score: 104
  • Evalue 4.60e-20
Cold shock protein {ECO:0000313|EMBL:EIL88279.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 52.0
  • Bit_score: 104
  • Evalue 6.40e-20
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 52.0
  • Bit_score: 102
  • Evalue 3.20e-20

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 168
ATGACTTTCGGTACGGTCAAATGGTTCAACGACGCCAAGGGTTTCGGTTTCATCGCACCTGAGGACGGGGGAGCGGACGTGTTCGTCCATTTTTCGGCGATCGCCAGCAAGGGCTTTCGCAGCCTGCAGGAAGGTCAGCGGGTGAAGTTCGAAGTCCGCGTCGCATGA
PROTEIN sequence
Length: 56
MTFGTVKWFNDAKGFGFIAPEDGGADVFVHFSAIASKGFRSLQEGQRVKFEVRVA*