ggKbase home page
Advanced Search
Search Help

scnpilot_solids2_trim150_scaffold_1453_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 11046..14831

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Putative helicase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PI92_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 999.99
  • Bit_score: 1534
  • Evalue 0.0
  • rbh
Putative helicase {ECO:0000313|EMBL:ELX11327.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 999.99
  • Bit_score: 1534
  • Evalue 0.0
viral RNA helicase similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 999.99
  • Bit_score: 1150
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Janthinobacterium sp. HH01 → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3786
ATGATCGACGGGGCAAGGCAGCTACCTGTTCATCACTTGACCATTCGAGTGCCATGGCATGACAGTGGTTGGAACGGGACCTTTTGCAACAATCCCTGCGGCAATACTAGCTGCACGATATTGAAGCGCGTCGCGACGGGTCGTGACGATAGTTTTGAGTCCGCTCACGCCGGCGAGAGCATCGAGGGGCTGACTCGAGATCAGATGCCGCCGTGTGTCGACGAACACGGCACCATCATGGCGCCGTTCCCGCAGTCGATGATTAAGCAGCATCCCTACGCCGATTGGAAAAAGGAGTCGCACGGACACTTTGCAGCCACGCCCTACACGATTCCACCTTACTCCGCAGCGACCATTCCGTTTCGCTGGATGTTGAGGGAGCAAGTCGAAGGTGGTGACGATGGCGCCGGCCGGATGCATGAATTGCAACTGGGATACGTAGTCGACCGCGAACCTGATTTGGGTACTAATACTTGGGTTCAGGAAGGAATCAACCAACGAGTCCTGCTCGACACCTTTATCAGTGCCGTACGGCCGGATGATTCGCTGGTGTTTTTCTACGCCAAGCGCACGCCGTTGGCGGAGGACCCACGGCGCGTGATCGTGGGAGTGGGTCGAGTCAAGACGGTGGGTGCCGCGACAGAGTATCGCTACGCCGGCGACAAGTGCCCACCGGACAAGATCAGTGGCTACTTGTGGGAGCGCAACGTAGAGCACTCGATACGGCCGGGTGGAGGTGATGGTTTCCTTCTTCCTTATCATGAAGTGGTAGCGTTGGCAGAGGAGGACGCCAGTATCGATTTGCCTGAGTGTGCGGCTTACGCACCACAGGAATATTTCGAACAGTTCTCCTACGGCAGTGAGCTGCTGGAGCAAGACGGCGCGATCGCCTCTCTGTTGGCCTTGGAGAAGGCGATCAAGGCGATGCGCGGCTTGCTCGACGCGCCGTGGGATTCGTATCTGCAATGGATCGATCGTGAGCTCAATCGGCTGTGGTCAGTTCGCGGCCCGTTCCCTGGCTTCGGGGCGGCGTTGAATGCCTTCGGCTTGCCACATGGCAACCTCTTGGCCTGGTACCTCGTGGGTGATGCAGAAAAGCCCGTCGATCCCTGGCCGCTGCTGAGTGAATCGCTCAAGCAGCCTGCGAGCCTGCCGGGCTATCTACGACACGGCATCGGCAAGACTTTGCAGCTGAAGTGGGAGAAATTACCTGCCGAACGACGTGCTCTTCTTCAACTTCTAGCGCGATTCAATTTGACGAACGCGCAAGCATTGCGCTGGTACCAGCAGACTGAACGTGAAGGGGCTGGGATTGTCCTGAGCGAGAAGGAAATTCTTGCCAACCCGTATTTGATCTTTGAGGAAGATCGACTGCAGATGGATCCGATTGCCTTTGCGGTGATTGATCGAGGCATGTTTCCACCCGATGTCATGCGCGACGAATTTTCCATACCCGAACCAAGCTTCGTGCATGAGGCGATCGACGAACGGCGCGTGCGCGCGGTGGTGATCCAGGCGTTGGAAGAAGCGGCCGGTCAAGGGCATACCCTGTTGCCAGCGGACTGGCTGATCGCTCGCGTGCGGGATCGGCCCATGAAGCCGGCATGTCCATTGGATGCCGATACTCTTTCGGTTGTTGGAGACTCGTTGGCTCCGCGTGTAGCCAGTTTGGCGCTGGGAGACCATGCCACCGCGTTTCAGATCGATCGCTACGTGGAGACCTCCAGCCTGATCAGCTCCACGGTCCTTAAGCGCAAGAAAGGGAAGCGCAACGAGGGCGAGGCCGATTGGCTGGGTCTCGTCAATACTGCCATTGACGGTGGAAGCCCGACGGTAGTCGCCACCCCAGACGATTTGATGGCGAGGCAGGAAAAGGCGGCGGCGCTCGAGGAGATCTATCGATCAAGGGTGTGCGTACTTTTAGGGCCCGCAGGCACCGGGAAAAGCACCCTGTTGAAGGCCTTGTGCAGTATCGATGAGGTTTCCGAGGGCGGCGTCTTGTTGCTGGCGCCCACCGGGAAAGCGCGTGTGCGACTTGAACAGGCCAGCGGTTTCGGCGGAAAGGCGCAAACCGTAGCCCAGTTCTTGCTAGGTTTGCAGCGATACGAGGGAAAAACAGGGCGTTACTACGTAAACCATGAGGCGCCGCGTTCTTCTGCCCATAAGACGGTCGTCATTGACGAGTGCTCCATGCTGACGGAGGAGCAAGTTGCCGCCTTGTTAGACGCGCTAAAAGGCTTTGATCGATTGGTCTTGGTAGGCGATCCCCGCCAGCTACCGCCGATTGGCGCCGGTCGGCCCTATGTTGACATCGTGCAACAGTTGAAACCTGAGATGGTGGACAGCTTGTTTCCGCGAGTGGCCGCTGGGTATGCGGAGCTTACCGTGGTGATGCGCCAGCAGGGCGAAACTGGCTCTACGCGTAGTGATGTGCTGCTCGCCAACGCATTCAGCGGACGAGCTCCGGACGCGGGCGCGGACGAAGTTTGGAACGACGTAGCGTCTGGACACACGCCCTTCGTAAAGCTTGTTCGATGGAATCAGCCTGATGGCTTACAGAAGCTACTGCTCACCGAGCTGGTCAACGAACTGCACCTGGACGGTGGAGATGAGGAGGTAGCCTTTGAAGAGTCCATTGGTGGCATTGCGTCGGATTACAACGGCCAAACCCATGTGTTTTTCAACAATCGCTACAAGGATCGACCGGGAGCCTCAGAAAAGGCAGAGCAATGGCAGATCCTGACGCCCCTCAGGCAGGGTCAAGCCGGGGTGCTGGCACTGAACAGGGCGATTCAACAGCGATTCCGCAAGCGATTTATCGAAATGGCACATGCCGAAGGCTACGGTCGGGTGATCCCCAGTCCAGCTGGACCGGAAGAAATCATCTACGGTGACAAGGTCATCAACATCCAGAACAAGAGGAATCGATACATCTATCCCCCCAAAGACGACAAATACGTTGCGAACGGGGATATCGGTGTCGTTGTGGGGCATCGAAAGACGAAGTTTCGACCGAAATTTCCTCGTGACGTAGAAGTTGAGCTTTGCAGTCAGCCTGGCTTTAGCTATCAGTACAACTCGCGGGAATTTGATGGGCAGGAAAGTTCGCCGCCGCTGGAATTAGCCTATGCGCTGACGGTGCATAAAACGCAGGGAAGTGAGTTCGGGGTCACGTTTGTTGTCGTGCCTAATCCTTGCCGATTGCTGTCGCGTGAAATGCTCTATACGGCCTTGACTCGGCACAGAGGCAAGGTGGTCATTTTTCACCAAGGCGACTTCCGAGATTTGCGGCGGTTCAGTCAGGATCAAGCCTCTGAGGTACTGGGTCGCATGACAAATCTGTTCGCGGCGTCCAATCCTGTAGAGGTGCGGTTGGGAAACAAGTCTCTATTCCTTGATAGCAATCTGATCTATCGCACTGACCATGGCGAACTGGTGCGTTCCAAATCGGAATGGATTATTGCTGACAAGCTTCATGCGGCGGGGATTGACTATCAGTACGAGCAACCTCTCATGTTGGATGGAGTAGAGCGATTCCCCGACTTCACGATCGTCGATGATGACAGCGGGCAAACCTGGTACTGGGAGCACAACGGAATGCTCAGCAACAGCGACTACCGGCAGCGGTGGGAGCGCAAGTTGGAAGCGTATCGTCGGCAGGGGATTTTGCCGCTGGCGGAAGGCGGCGGAAAGAATGGGACGCTGCTAGTTACGGAAGAGAAGCAAGGTGCGGGGTTAAGTGCACAGGACATCAACCTCAATATCGCAACGATCCGAGGTTCATAA
PROTEIN sequence
Length: 1262
MIDGARQLPVHHLTIRVPWHDSGWNGTFCNNPCGNTSCTILKRVATGRDDSFESAHAGESIEGLTRDQMPPCVDEHGTIMAPFPQSMIKQHPYADWKKESHGHFAATPYTIPPYSAATIPFRWMLREQVEGGDDGAGRMHELQLGYVVDREPDLGTNTWVQEGINQRVLLDTFISAVRPDDSLVFFYAKRTPLAEDPRRVIVGVGRVKTVGAATEYRYAGDKCPPDKISGYLWERNVEHSIRPGGGDGFLLPYHEVVALAEEDASIDLPECAAYAPQEYFEQFSYGSELLEQDGAIASLLALEKAIKAMRGLLDAPWDSYLQWIDRELNRLWSVRGPFPGFGAALNAFGLPHGNLLAWYLVGDAEKPVDPWPLLSESLKQPASLPGYLRHGIGKTLQLKWEKLPAERRALLQLLARFNLTNAQALRWYQQTEREGAGIVLSEKEILANPYLIFEEDRLQMDPIAFAVIDRGMFPPDVMRDEFSIPEPSFVHEAIDERRVRAVVIQALEEAAGQGHTLLPADWLIARVRDRPMKPACPLDADTLSVVGDSLAPRVASLALGDHATAFQIDRYVETSSLISSTVLKRKKGKRNEGEADWLGLVNTAIDGGSPTVVATPDDLMARQEKAAALEEIYRSRVCVLLGPAGTGKSTLLKALCSIDEVSEGGVLLLAPTGKARVRLEQASGFGGKAQTVAQFLLGLQRYEGKTGRYYVNHEAPRSSAHKTVVIDECSMLTEEQVAALLDALKGFDRLVLVGDPRQLPPIGAGRPYVDIVQQLKPEMVDSLFPRVAAGYAELTVVMRQQGETGSTRSDVLLANAFSGRAPDAGADEVWNDVASGHTPFVKLVRWNQPDGLQKLLLTELVNELHLDGGDEEVAFEESIGGIASDYNGQTHVFFNNRYKDRPGASEKAEQWQILTPLRQGQAGVLALNRAIQQRFRKRFIEMAHAEGYGRVIPSPAGPEEIIYGDKVINIQNKRNRYIYPPKDDKYVANGDIGVVVGHRKTKFRPKFPRDVEVELCSQPGFSYQYNSREFDGQESSPPLELAYALTVHKTQGSEFGVTFVVVPNPCRLLSREMLYTALTRHRGKVVIFHQGDFRDLRRFSQDQASEVLGRMTNLFAASNPVEVRLGNKSLFLDSNLIYRTDHGELVRSKSEWIIADKLHAAGIDYQYEQPLMLDGVERFPDFTIVDDDSGQTWYWEHNGMLSNSDYRQRWERKLEAYRRQGILPLAEGGGKNGTLLVTEEKQGAGLSAQDINLNIATIRGS*