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scnpilot_solids2_trim150_scaffold_1473_8

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(7719..7985)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AbrB family n=2 Tax=Nitrosococcus oceani RepID=Q3J855_NITOC similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 89.0
  • Bit_score: 126
  • Evalue 1.00e-26
AbrB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 89.0
  • Bit_score: 126
  • Evalue 3.30e-27
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ABA58991.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 89.0
  • Bit_score: 126
  • Evalue 1.50e-26

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Taxonomy

Nitrosococcus oceani → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGACATCCACACTTACCAGCAAGGGCCAGGTCACCGTGCCCAAGAAGATCCGTGACTATCTCGGCCTGCAGCCGGGCTCGACCGTGGCTTTCTCGCTGGGCCCTCATGGCGAGGTAGTGGTACAGACAGGAGAAGCCAGATCCCAGCGCCACAAGGGGCGCCTGCGGAAACTGCGCGGCACGCTGGCCACCGGCAGAAGCACCGATGAGTTGATGAGCCTGCTGCGCGGCTACGACGCCGATCCTCGCGATCCCGGCCTGAAATGA
PROTEIN sequence
Length: 89
MTSTLTSKGQVTVPKKIRDYLGLQPGSTVAFSLGPHGEVVVQTGEARSQRHKGRLRKLRGTLATGRSTDELMSLLRGYDADPRDPGLK*