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scnpilot_solids2_trim150_scaffold_1071_17

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 20758..26748

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Type VI secretion protein IcmF n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0T5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 999.99
  • Bit_score: 2002
  • Evalue 0.0
Type VI secretion protein IcmF {ECO:0000313|EMBL:EIL93076.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 999.99
  • Bit_score: 2002
  • Evalue 0.0
type VI secretion protein IcmF; K11891 type VI secretion system protein ImpL similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 999.99
  • Bit_score: 1300
  • Evalue 0.0

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 5991
ATGGAAAACAACAAGGTTGTGTGGAGTGAGGGGCTGTTCCTGCGCCCGCAGCACCTGCAGCAGCAGGAGCGTTACCTGGAGCGTTTCGTCGAACTGCGCGCCGGCAGCCTGCGTCCTTACACCTGGGGCTTCTCCGAACTGGAGCTGGAAACCGACCTGCTGGCGATCGGCAAGCTCGGCATCAAGCGCGCGCGTGGTGTGTTTCCCGATGGCACGCCGTTCGACATGCCCGGCGACGATCCGCTGCCGCTGGCGCTGGACGTCAACGACAACTGGCGCGACCAGACCGTCTTCCTGACCCTGCCGCTGCGCTCGCCGGCGCAGCCGGACAGCGGCCGGCCCGAGGCGCCGGCGGAAAAGCTGTTCCGTTATCGTGTGCGCGAGACCGAGGTGCGCGACGCCTCCGGCAGCGTCGACGGGCTCACCGTGCTGGAGGTGGGCGGGCTCAACAGCCGGCTGTTGCCGCAGTCGCAACCGCTCGAAGGGCTGGCGCAGATTCCGGTGGCGCGCATCGTCGAATGCCGCTCCGATCGGCGGGTGATCCTGGAAGAGGCGTTCATGCCGACGGTGCTGAGCTGCCAGGCCGCGTCGCGGTTGAGCACGTTTCTGTCCGAACTGCTGGGCCTGCTGCACCAGCGCGGCGAGGCGCTGGCCAGCCGCGTGGCGGTCACCGATCGCGGCGGCGCCGCCGAGATCGCCGACTTCCTGCTGCTGCAGGTGGTCAACCGCTATCAGCCGCTGATCGCGCACCTCTGTGCCGCGCCGATCCTGCATCCGGAGGATTTCTACCGGGTGCTGGCCGAGATGGCCGGCGAGCTGGCCACTTTCACTGCTGCCGGCAAGCGTCCATCGGCATTTCCGGCGTACCGCCATGAGGCGCTGTACGCGAGCTTCGAGCCGCTGATCGCGGCGCTGCGCACCAGCCTCAGCGCGGTGATGGAGCAGACTGCGATCCCGATCCCGATGCAGCAGCGCAAGTTCGGCGTGTGGGTGGCGGTGGTGCCGGACCTGAGCCTGATCGATACCGCAGCCTTCGTGCTGGCGGCGAAGGCGGACCTGAAGTCCGAAGACTTGCGCCGCCAGCTGCCGGCGCAGTCGAAGATCGGTCCGGTGGAGAAGATCCGCGACCTGGTGAACCTGCAGCTGCCGGGCATCCCGGTGGCGCCGATGCCGGTGGCGCCGCGGCAGATTCCGTACAACTCCGGCTACCTGTATTTCGAGTTCGACAAGAATAGCAATGGTCCCCACGACGACGATCCGCAGCAGGACCGGACCATAGTCCGCCCGCGCGGCGCACCTGCACCGGCTGCGCCGACCCCCGCGCCCGCTCCTGTTCCCGCAGCGCCTCCCGCCACCCGGCCGACTGCCGCGCCGGCACGGCCGGCGGCGGGTCACGCACAGGTTCCCGCGGCCGCAATCGGCGATTTCCTGGGTGCCGGGCTCAATACCCTGGTTCAGGCGGCCAGCCCCTTGCTGCTGTTGTCGGTGCAGTTGCGCAACAGCGCGTCACAGCCCGACGCGGCGCGCCTGCGCGAGCAGGTCATCGCCCAGGTGCGCCAGTTCGAGAGCAACGCGCAAGCCGCCGGCATTGCGGCGCAAACCATCACCGCCGCGCGTTACGTGCTGTGCACCACGCTCGACGAGGCGGTGATGAACACGCCGTGGGGCGGGCAGAGCGGTTGGGCGGCCAAGACGCTGCTGGTGGCCTTCCACGGCGAGTCGTACGGTGGCGAGAAGTTCTTCCTGATCCTGGATCGCCTGTGCGCGGATTTCTCGCGCCACATCGACCTGATCGAACTGATGTACATCTGCCTCACGCTCGGTTTCCGACATCCAGGAGGAGCTCTACCGCCGCATCAAGGCGCAGCGCCCGCCGGCGGCGGACGAACTGGCACCGCACTGGAAGGGCATCGAGGACCGGCGCAACCCGCTGGTGCGCTACGTGCCGCTGTGGGTGATCGTGGCGGCCGGCGCCTGCATCCTGCTGGGCGCGTTCCTGTACTTCTACACCCGCCTGAACGAGTTGTCCTCGCCGGTCAGCGCGCAGGTGGCGCAGATCGGCTTGCGCAGCGCGGTGCCGCCGGACGAGTCGCGGCTGCGCCAGACCCAGCCCAAGGTCGAGCGCAAGAGTCTCAAGCAGTTGCTGGCGCCGCAGGAGCAGGCCGGCGCGCTGACCGTGGAGGAGAAGCCCGACGGCTCGGCGCTGGTGCGGCTCGATGCACCGGCGATGTTCGCCTCCGGCGGTACCGAGGTTACAGCGCGGCAGATCCCGATGCTGCACGCGATCACCGCGGCGCTGAACCAGGTACCGGGCCGGGTGGTGGTGGTTGGCCATACCGACGACCAGCCGGTTCACTCGCTGAAGTTCAAGGACAACTACGCGTTGTCGGCGGCGCGCGCGCGTTCCGTGGTGCAGATCCTCAGCGAGGGCATCGACAACGCCGGGCGGCTCGAATCCAGCGGTGCCGGTTCGTCGCAGCCGATCGCGCTGCCGCCGGACCTGCCAGCCAACCGGGCGCGCAACCGTCGCGTCGAAATTCTCTACAGCCCGGAGGACTGAACATCGTGGGCAAGCTTCTTGCGCTGTTCAAATCCCGCCTGCGGCTGCTGGTGATCCTGGTGATCGTGGTGATCTGGGCGGTGTGGCTGCAGGTGCGGCAGATGCGCGTGCGCGGCAAGGCGCGGCAGATGGCCAGTGACCTCAGCGAGCAGGGTGCGCCGGCGACTGCGGGCATCGACGATCGCGCCGCCAACGAACGCGCGCAATTGCAGGGGCGCTTCCAGGAAGCGGTGGACACCTTGCGCAAGAACCGCAGCGGCGGCACCAACCTGTACGCGCTGCCCTGGTACGTGGTGATCGGCCCGCCGGGTTCGGGCAAGAGCACCCTGCTGCAGAACTCCGGCCTCAACTTCCCGCTGTCGAACAAGTTCGGCAAGGAAGCGATCCGCGGCGTCGGCGGCACCCGCAACTGCGACTGGTGGTTCACCGACGAGGCGGTGTTCCTGGATACCGCCGGACGCTACACCACCCAGGACTCCGACCGCGGCGCGGATGCGTCGGCGTGGACGGAATTCCTCAACCTGCTGCGCAAGTACCGCAAGCGGCGGCCGATCAACGGCGTGATCGTGGCGATGAGCCTGTCGGACCTGCTCACCCTGGATGAGGCCGGGCGGCAGCAGCACATCATGGCGGTGCGGCAGCGGCTGGACGAGCTGGCCAAGCACCTGCGCATCGGGGTGCCGGCCTACCTGGTGTTCACCAAGTGCGACCTGGTGGCCGGCTTCACCGAGTTCTTCGACGACCTCACGCCGGAGCTGCGCAGCCAGGTCTGGGGCATGTCGTTCCCGGTCGACCAGACCATGGCCGGCACCGCGGCCAAACAGTTCCTGGCGGAGTTCAACCTGCTGCTGGAGCGGCTCAACACGCGCATCCTCGATCGCCTGCATCGCGAGCGCGACCGCCAGCGGCGCGCGGCGATCCTGTCGTTTCCGCAGCAGCTGGGCGCCTTGCGCGAGATCACCCGGCAGTTCGTCGAAGGCGTGTTCACTGGCCATCAGTACGACGCGCCGCTGCTGCTGCGTGGCGCGTATTTCACCTCCGGCACGCAGGAAGGCACGCCGATCGACCGCATGATGGGCGCGGTGGCGCGCACCTTCGGGCTGGACGCCTCGCGCCTGCACGTGCCCGGCGCGCAGAGCCGCACTTTCTTCGTCGAGCGTCTGCTCAAGGACGTGCTGTTCCGCGAATCGGGCTTCGCCGGCACCGATCCCAAGCTGGAGCGCCAGAAGGTGCTGCTGCAGGCGGCCTGCTACATCGGCGTGCTGCTGGCCTGCGGCCTGCTGGTGTTCGGCCTGGCCACCAGCTATCGGCGCAACGGCAATTATCTGGCCGACGTGCACACGGCGCTGGCCAAGTATCCGGCGCAGAGCGATCTCTCGCTGGCGCCGAACCAGCAGGCGTATTTCGCGCTGGTGCTGGAGCGGCTGGAAGCGCTGTCCGCGGCGGTCGACGTGGCCGACCAGCACCAGGGCGACGTGCCGCTGTCGATGCGCCTGGGCCTGTACCAGGGCAACGCGGTGGGCGACGAGGTGCGCGATGCGTACTACCGCGAGCTCAACGCGATCCTGCTGCCCGGCGTGGCCTCGCAGTTCCGCGCCGGGCTGGCCGCCAACGCCGGCGACCCGCAGATGCTTTATTACTACCTGAAGGGTTACCTGATGCTGGGCGAGCCCAAGCATCTGGACCACGACCAGATCGTGGCGCTGGCCGGGGTCGAGTGGCAGCGCCTGTTTCCGAACGACCCGGTGCTGCAGAAGGCGCTGAGCAAGCACTTCGACGCACTGGTCGCGCACGAGGGGCGCCTGCGCCCGCTGAGCCTGGACGACAACCTGGTCGAGCAGGCGCGCAGCACGCTGCGCACCGCGGACCTTGCCACGCTGATCTACGGAAACCTCAAGCTCACCGCCGGCAGCGGCAACTACCCGCCGCTGCGGCTGGACAAGGAACTGGGCCTGCTCGGCAACGTGTACCAGCGGCGCAGCGGCAAACCGCTGTCCGATCCGATCCCGGCGTTGTTCACCCAGCCGGTGTTCAAGCATGAGGTGGACAAGGGCATCGAACAGTCGGTGGCGCAGTTCGCCGCGGACGACTGGGTCTTCGGCGCCACCAAGATCGACGCGGTGGAGAAGGCCCGGCTCGCCCAGCAGGTGCTGGGGTTGTACGAGCAGGATTACATCAAGGCCTGGGACGACGTGCTTGCCGACCTGCAGTTGCAGCCGATCAACAACATCCAGGATGCCAGCGCCATCGCCGCCAAGCTGGCCGGCCCCAACTCGCCGCTGAAACTGCTGCTCAAGGTGGTCCGCGACAACACCAGCGACCTGATGCGCGCGCCGCCGGGCGATGCTGCCGACAAGGCCGAGGAGGCCGCCAAGAAGCTGGCGCAGCAGCGTGCCACGCAGACTGCGCTGGCACGGGCACTGGCGCAGGCCGGCGGCACCGGCGCGGCCGGTGGCGATGCGGCCAGCGAGAAACCGGGCAAGGTCATCAGTGACCATTTCGCCGAGATCGACAAGCTCACCGAGGGCGCGCCCGGCGCGCAGCCGATCGACCAGACCCTGAAGACGCTGGACGACCTCAGCAAGACCTTGCTGACCATGGGCGATTTCAGCAACGCGGCCGGCCAGCCCAACCCGCAGTTGCTGCTGGCCCAGCAGGCTGCGGCGCAACTCCCGCCGCCGGCCTCCAACTGGTTTGCCGCACTCACCGGCAAGAGCCAGGCGCTGGTGGCCAGCGGCACCAAGAGCGCGCTGGACGACCAGTACCAGCAGGCCGTCGGCAAGGACTGCGCCGACTTCACCCGCGGACGCTACCCGTTCTCGCCGTCGAGCAACAACGACATCCCGCTGCAGAACTTCGGCGAGCTGTTCGGCTATGGCGGTCGCTTCGACAGCTTCTACAACCAGACCGCCGGCAAGCTGATCGATGCCAGCGGCCGCAACTGGCAGTGGAAGACCGGGCCCGGCGCGATCAGCGGTTCGGCCGGCATGCTGGCGCAGTTGCAGGGCGCCGACCGGATCAAGCAGATGTTCTTCCGCAGCGGCAACCTGCCGGAGGTGGACTTCACCTGGCTCACTCCGGTGCTCGATGCCGGCATCGGCAAGCTGGTGATCGACGTCGATGGGCAAAAGTACGAATACCAGCCCGGTGGCGCGACCAACGTCAGCATGAAATGGCCCGGACCGCAGCCTGGCCGCGTGTCCATCTCCGCCTATGACGCCGCGGGCAACCTGCTTACCACGTTCGACTATCGCGGCGACTGGGCGTTCTTCCGTGCGCTGCAGGCGGCCAACTTGCAGAAGCAGTCCGACCTGCGCTTCGTGGCCAGTTTCAATTTCGGCGGCCACGTGGCGAAGGTGACGCTGCAGGCCAACAACCTGAAGAACCCGTTCCTCAGCAATGCCCTGTCCAGCTTCCGGTGCGGAGGCTGA
PROTEIN sequence
Length: 1997
MENNKVVWSEGLFLRPQHLQQQERYLERFVELRAGSLRPYTWGFSELELETDLLAIGKLGIKRARGVFPDGTPFDMPGDDPLPLALDVNDNWRDQTVFLTLPLRSPAQPDSGRPEAPAEKLFRYRVRETEVRDASGSVDGLTVLEVGGLNSRLLPQSQPLEGLAQIPVARIVECRSDRRVILEEAFMPTVLSCQAASRLSTFLSELLGLLHQRGEALASRVAVTDRGGAAEIADFLLLQVVNRYQPLIAHLCAAPILHPEDFYRVLAEMAGELATFTAAGKRPSAFPAYRHEALYASFEPLIAALRTSLSAVMEQTAIPIPMQQRKFGVWVAVVPDLSLIDTAAFVLAAKADLKSEDLRRQLPAQSKIGPVEKIRDLVNLQLPGIPVAPMPVAPRQIPYNSGYLYFEFDKNSNGPHDDDPQQDRTIVRPRGAPAPAAPTPAPAPVPAAPPATRPTAAPARPAAGHAQVPAAAIGDFLGAGLNTLVQAASPLLLLSVQLRNSASQPDAARLREQVIAQVRQFESNAQAAGIAAQTITAARYVLCTTLDEAVMNTPWGGQSGWAAKTLLVAFHGESYGGEKFFLILDRLCADFSRHIDLIELMYICLTLGFRHPGGALPPHQGAAPAGGGRTGTALEGHRGPAQPAGALRAAVGDRGGRRLHPAGRVPVLLHPPERVVLAGQRAGGADRLAQRGAAGRVAAAPDPAQGRAQESQAVAGAAGAGRRADRGGEARRLGAGAARCTGDVRLRRYRGYSAADPDAARDHRGAEPGTGPGGGGWPYRRPAGSLAEVQGQLRVVGGARAFRGADPQRGHRQRRAARIQRCRFVAADRAAAGPASQPGAQPSRRNSLQPGGLNIVGKLLALFKSRLRLLVILVIVVIWAVWLQVRQMRVRGKARQMASDLSEQGAPATAGIDDRAANERAQLQGRFQEAVDTLRKNRSGGTNLYALPWYVVIGPPGSGKSTLLQNSGLNFPLSNKFGKEAIRGVGGTRNCDWWFTDEAVFLDTAGRYTTQDSDRGADASAWTEFLNLLRKYRKRRPINGVIVAMSLSDLLTLDEAGRQQHIMAVRQRLDELAKHLRIGVPAYLVFTKCDLVAGFTEFFDDLTPELRSQVWGMSFPVDQTMAGTAAKQFLAEFNLLLERLNTRILDRLHRERDRQRRAAILSFPQQLGALREITRQFVEGVFTGHQYDAPLLLRGAYFTSGTQEGTPIDRMMGAVARTFGLDASRLHVPGAQSRTFFVERLLKDVLFRESGFAGTDPKLERQKVLLQAACYIGVLLACGLLVFGLATSYRRNGNYLADVHTALAKYPAQSDLSLAPNQQAYFALVLERLEALSAAVDVADQHQGDVPLSMRLGLYQGNAVGDEVRDAYYRELNAILLPGVASQFRAGLAANAGDPQMLYYYLKGYLMLGEPKHLDHDQIVALAGVEWQRLFPNDPVLQKALSKHFDALVAHEGRLRPLSLDDNLVEQARSTLRTADLATLIYGNLKLTAGSGNYPPLRLDKELGLLGNVYQRRSGKPLSDPIPALFTQPVFKHEVDKGIEQSVAQFAADDWVFGATKIDAVEKARLAQQVLGLYEQDYIKAWDDVLADLQLQPINNIQDASAIAAKLAGPNSPLKLLLKVVRDNTSDLMRAPPGDAADKAEEAAKKLAQQRATQTALARALAQAGGTGAAGGDAASEKPGKVISDHFAEIDKLTEGAPGAQPIDQTLKTLDDLSKTLLTMGDFSNAAGQPNPQLLLAQQAAAQLPPPASNWFAALTGKSQALVASGTKSALDDQYQQAVGKDCADFTRGRYPFSPSSNNDIPLQNFGELFGYGGRFDSFYNQTAGKLIDASGRNWQWKTGPGAISGSAGMLAQLQGADRIKQMFFRSGNLPEVDFTWLTPVLDAGIGKLVIDVDGQKYEYQPGGATNVSMKWPGPQPGRVSISAYDAAGNLLTTFDYRGDWAFFRALQAANLQKQSDLRFVASFNFGGHVAKVTLQANNLKNPFLSNALSSFRCGG*