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scnpilot_solids2_trim150_scaffold_2518_10

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 8294..9784

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine/carnitine/choline-binding ABC transporter substrate-binding and permease component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD93_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 498.0
  • Bit_score: 741
  • Evalue 5.00e-211
periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 494.0
  • Bit_score: 738
  • Evalue 1.00e-210
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 491.0
  • Bit_score: 758
  • Evalue 7.20e-216

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1491
ATGACCGGCATGCCTGCCCGCATCGCCATCGTGCTGCTCGCCGGCCTGCTGCCGGTGCTGGCGATCGCGCAACCGGTGCGGATCGGCTCCAAGCAATTCACCGAGTCGGTGATCCTGGGCGAGATCGCGCGACTGGCCGCACGCGATGCCGGCGTCCAGGCCGTGCACGAGCGCGAGCTGGGTGGCACCCGCATCCTGTGGAAGGCCCTGCAGCAGGGCGACATCGACGCCTACCCCGAGTACACCGGCACACTGACCCACGAGCTGCTGCAAGACGTGCCGGCCGACGCCGACATCGCCACCTTGCGCGCCCGGCTGAAACCGCTGGGCATCGGCATCACCGACCCACTCGGTTTCGACAACACCTACGCGATCGGCATGCGTCAGGACGAGGCGGCGCGACTGGACATCCGCCGCATCTCCGACCTGCGCGCGCACCCGTCGCTGCGCTTGGGCTTCTCCAACGAGTTCATGGACCGCGGCGATGGCTGGCCGGGTTTGCGTCGCGCCTATGCCCTGCCGCAAACGAAGGTCAGCGGGCTGGATCACGTGCTGTCCTACCGCGCGGTGGCCAGCGGCGCGGTGGATGCGATCGACCTGTACAGCACCGACGCGGAGATCCCCTACTACCACCTGCGCACCCTGCCCGACGACCGCCACTACTTCCCGCGCTACCAGGCGGTGTTCCTCTATCGGCTGGCGCTGGAGCGGGACGAGCCCGCCTTCGTCGCCGCCCTGCGCCGCCTCGCCGGCCGCATCGACGAGCAGGCGATGCGCACGATGAATGCCGCGGTGAAGCTCGACGGCCGCCGCGACAGCGCGGTGGCCGCCGACTTCCTCGGCACCCGCGTCGAGGCGGGGCGGCGCGGCCTGTGGCAGCGGCTGCGCCAGCGCAGCGTGGAGCACATCGAGCTGGTGGCGAGCTCGCTGGGCCTGGCGCTGGCGCTGGCGATCCCGCTCGGCATCGTCGCCGCGCGTCGGCGCCGGCTGGGGCAACTGGTGATCGCGGCCACCGGCGTGCTGCAGACGGTGCCGTCGCTGGCGATGTTCGTGTTCATGATCCCGTTGCTGGGCATCGGCACCTGGCCGGCGGTGGCCGCGCTGTTCCTGTACAGCCTGCTGCCGATCGTGCGCAACACGCATGCCGGCCTGGTCGGCATTGCGCCGGAACTGATGGAATCGGCCGCGGCACTGGGCCTGCCACGGCGGGTGCGGCTGCGCCGCATCGAATTGCCGCTGGCGATGCGCTCGATCCTGGCCGGCATCAAGACCGCCGCAGTCATCAATGTGGGCACGGCCACCCTGGCCGCGCTGATCGGCGCCGGTGGCTACGGCCAGCCGATCCTCACCGGCATCCGGCTGGACAGCATCCCGCTGATCCTGGAAGGCGCGATCCCCGCGGCGGTGCTGGCGCTGCTGGTGCAGGGCCTGTTCGAACTGGTCGAGCGCTGGCTGACGCCGCGCGGGCTGCGCCTGCAGGCGCGGCAATAA
PROTEIN sequence
Length: 497
MTGMPARIAIVLLAGLLPVLAIAQPVRIGSKQFTESVILGEIARLAARDAGVQAVHERELGGTRILWKALQQGDIDAYPEYTGTLTHELLQDVPADADIATLRARLKPLGIGITDPLGFDNTYAIGMRQDEAARLDIRRISDLRAHPSLRLGFSNEFMDRGDGWPGLRRAYALPQTKVSGLDHVLSYRAVASGAVDAIDLYSTDAEIPYYHLRTLPDDRHYFPRYQAVFLYRLALERDEPAFVAALRRLAGRIDEQAMRTMNAAVKLDGRRDSAVAADFLGTRVEAGRRGLWQRLRQRSVEHIELVASSLGLALALAIPLGIVAARRRRLGQLVIAATGVLQTVPSLAMFVFMIPLLGIGTWPAVAALFLYSLLPIVRNTHAGLVGIAPELMESAAALGLPRRVRLRRIELPLAMRSILAGIKTAAVINVGTATLAALIGAGGYGQPILTGIRLDSIPLILEGAIPAAVLALLVQGLFELVERWLTPRGLRLQARQ*