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scnpilot_solids2_trim150_scaffold_2518

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2518_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(190..1056)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD84_9GAMM
Protein of unknown function (DUF3014)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2518_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1127..1888)
DNA (762bp) protein (254aa)
Putative ABC transporter inner membrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD86_9GAMM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2518_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1885..2811)
DNA (927bp) protein (309aa)
ABC transporter-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W495_9GAMM
ABC transporter-like protein {ECO:0000313|EMBL:EIL94286.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type multidrug transport system, ATPase component
scnpilot_solids2_trim150_scaffold_2518_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2962..3921
DNA (960bp) protein (320aa)
Bacterial lipocalin n=1 Tax=Rhodanobacter denitrificans RepID=I4WWV1_9GAMM
bacterial lipocalin
Bacterial lipocalin {ECO:0000313|EMBL:AGG89557.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2518_5
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3890..4309)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000376AB6C
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase SpoU {ECO:0000313|EMBL:AFU99214.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 /; SA1).;"
scnpilot_solids2_trim150_scaffold_2518_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4363..4818)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4A1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94292.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2518_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4976..6187
DNA (1212bp) protein (404aa)
Metal-dependent phosphohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4A2_9GAMM
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:EIL94293.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
metal-dependent phosphohydrolase rbh
scnpilot_solids2_trim150_scaffold_2518_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6240..7481
DNA (1242bp) protein (414aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4A3_9GAMM
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIL94294.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase/phosphodiesterase
scnpilot_solids2_trim150_scaffold_2518_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7530..8297
DNA (768bp) protein (256aa)
ABC-type proline/glycine betaine transport system, ATPase component n=1 Tax=Rhodanobacter denitrificans RepID=M4NHK3_9GAMM
ABC-type proline/glycine betaine transport system, ATPase component
ABC-type proline/glycine betaine transport system, ATPase component {ECO:0000313|EMBL:AGG89562.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2518_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8294..9784
DNA (1491bp) protein (497aa)
Glycine betaine/carnitine/choline-binding ABC transporter substrate-binding and permease component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD93_9GAMM
periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2518_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9841..10419
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0V3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93094.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2518_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10594..11463
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD96_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97437.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative permease
scnpilot_solids2_trim150_scaffold_2518_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11483..12133)
DNA (651bp) protein (217aa)
2'-5' RNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWW2_9GAMM
2'-5' RNA ligase
2'-5' RNA ligase {ECO:0000313|EMBL:AGG89567.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2518_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12286..12549)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7V6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95547.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
DnaK suppressor protein
scnpilot_solids2_trim150_scaffold_2518_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12588..13352)
DNA (765bp) protein (255aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4B0_9GAMM
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIL94301.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase/phosphodiesterase (GGDEF EAL domains)
scnpilot_solids2_trim150_scaffold_2518_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13475..13711
DNA (237bp) protein (79aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4B1_9GAMM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EIL94302.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA dehydrogenase
Displaying 16 items

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