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scnpilot_solids2_trim150_scaffold_3327_14

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(18223..18519)

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 98.0
  • Bit_score: 187
  • Evalue 1.00e-44
glycine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 98.0
  • Bit_score: 172
  • Evalue 5.80e-41
Serine hydroxymethyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJA2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 98.0
  • Bit_score: 187
  • Evalue 7.20e-45

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 297
CTGGTCGACATGATCGGCAAGCCGATCACCGGCAAGGACGCCGAGGCCGCGCTGGGCAAGGCGCACATCACGGTCAACAAGAACGCCGTGCCGAACGACCCGCAAAAGCCCTTCGTCACCTCCGGCCTGCGCGTAGGCACCCCCGCCGCCACCACCCGCGGTTACAAGGAAGCCGACTGCGTGGCCCTGGCCGGCTGGATCTGCGACGTGCTCGACGCCCCGAACGACGCCGCCGTGATCGCCCGCGTGCGCGACGCGGTGACGGCGCAGTGCCGCAAATTCCCGGTCTACGGCTGA
PROTEIN sequence
Length: 99
LVDMIGKPITGKDAEAALGKAHITVNKNAVPNDPQKPFVTSGLRVGTPAATTRGYKEADCVALAGWICDVLDAPNDAAVIARVRDAVTAQCRKFPVYG*