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scnpilot_solids2_trim150_scaffold_4937_3

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 1624..2160

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 177.0
  • Bit_score: 327
  • Evalue 8.70e-87
Peptide deformylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNX5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 177.0
  • Bit_score: 327
  • Evalue 6.20e-87
  • rbh
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 177.0
  • Bit_score: 320
  • Evalue 4.10e-85

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGATCCACGAGATCCTCAAGATGGGTGACCCCCGGCTGCTGCGCATCGCGCCGCCGGTGCCCCCGGCGATGCTCGGCAGCGCGGAGCTCGACATGCTGATCAAGGACATGTTCGAGACCATGCGCGCTGCCGACGGCGTGGGCCTGGCCGCGCCGCAGATCGGCGTGGACCTGCAGCTGGTGATCTTCGGCTTCGAGCATTCCGAGCGCTATCCCGACGCCCCCGAGGTGCCGCAGACGATCCTGCTCAATCCGGTGATCACCCCGCTGTCGCAGGACATGGAGGTGGGCTGGGAGGGCTGCCTGTCCGTGCCCGGGCTGAACGGCGCGGTGAGCCGTTTTTCGCTGATCCGCTACCAGGGCCTCGACCCGCGCGGCCAGCGCATCGAACGCACCGCCGAGGGTTTCCACGCGCGCGTGGTGCAGCACGAATGCGACCACCTGATCGGTCGCCTCTACCCTTCGCGCATCACCGATTTCAGCAAGTTCGGCTACACCGACGTGCTGTTTCCGGGTCAGCCGCCAGCAGATGCCTGA
PROTEIN sequence
Length: 179
MIHEILKMGDPRLLRIAPPVPPAMLGSAELDMLIKDMFETMRAADGVGLAAPQIGVDLQLVIFGFEHSERYPDAPEVPQTILLNPVITPLSQDMEVGWEGCLSVPGLNGAVSRFSLIRYQGLDPRGQRIERTAEGFHARVVQHECDHLIGRLYPSRITDFSKFGYTDVLFPGQPPADA*