ggKbase home page

scnpilot_solids2_trim150_scaffold_4937

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4937_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..589)
DNA (588bp) protein (196aa)
Carbon starvation protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ82_9GAMM
Carbon starvation protein {ECO:0000313|EMBL:EIL87273.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
carbon starvation protein, predicted membrane protein
scnpilot_solids2_trim150_scaffold_4937_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

760..1542
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NBE9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87929.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4937_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1624..2160
DNA (537bp) protein (179aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Peptide deformylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VNX5_9GAMM rbh
peptide deformylase
scnpilot_solids2_trim150_scaffold_4937_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2299..2667
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B49FA
Uncharacterized protein {ECO:0000313|EMBL:EIL88917.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4937_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2696..2941)
DNA (246bp) protein (82aa)
Transcriptional activator FtrA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ88_9GAMM
transcriptional activator FtrA; K13633 AraC family transcriptional regulator, transcriptional activator FtrA
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4937_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3156..3413
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NDH5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87932.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4937_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3482..4294)
DNA (813bp) protein (271aa)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEI5_9GAMM
orotidine 5''-phosphate decarboxylase, subfamily 2
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4937_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4402..4545)
DNA (144bp) protein (48aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZB9_9GAMM
ATP-binding cassette protein, ChvD family
ATP-binding cassette protein, ChvD family {ECO:0000313|EMBL:AGG87934.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 8 items

View Taxonomy