ggKbase home page

scnpilot_solids2_trim150_scaffold_2784_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(8256..10145)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 629.0
  • Bit_score: 1162
  • Evalue 0.0
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7) similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 629.0
  • Bit_score: 1162
  • Evalue 0.0
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJM1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 629.0
  • Bit_score: 1162
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1890
ATGAATGACCTCAGCCATTATCCCCGCCTGGCTTCGATCGACGCGCCCGCCGACCTGCGCCGACTGCCCGACAGCGAACTGCCGCAAGTCGCCGACGAACTGCGCCAGTATCTGATCGAGGCCGTCGCCAGCTCCGGCGGCCACTTCGGCGCGGGCCTGGGCGTGGTCGAGCTGACCGTGGCCCTGCACCACGAGTTCGACACGCCGCACGACCGCCTGGTCTGGGACGTCGGCCACCAGTGCTATCCGCACAAGATTCTTACCGGCCGCCGTGACCGCATCACCACGATCAAGAAGAAGGACGGCCTGGCGCCGTTTCCGCGCCGTGAGGAAAGCGAGTACGACACCTTCGGCGTCGGCCACTCGTCCACCTCGATCTCGGCCGCGCTGGGCATGGCGATCGCCGCGCAGGCCAGCGGCGAGCAGCGCAAGGTGGTGGCCGTGATCGGCGACGGCGCGATGACCGCCGGGCTGGCGTTCGAGGCGCTCAACCACGCCGGCGACGTCGAGCCCGACCTGCTGGTGGTGTTCAACGACAACGGCATGTCGATCAGCGAGAACGTGGGCGCGCTGACCAAGATGATGGCGCGCGCGATGGCCAGCCGCCGCCTCAACGACTTGCGCGAGCGGGCCAAGCGGGCCATTCCCAAGCAGTCGTTCATGGGCCGCTGGTTCAAGCGCTGGGAGGAGCACGCCAAGGGCATGTTCGTGCCCTCGACGCTGTTCGAGGAACTCGGCTTCCACTACACCGGCCCGATCGACGGCCACAACATCCCGCAACTGCTGCAGGCGCTGCGCACGGTGAAGAACCTGCCCGGCCCGCAGCTGCTGCACGTGATCACCACCAAGGGCAAGGGCTACGCCCCGGCCGAACAGGCGCAGATCGAATACCACGCGGTCGGCCCGTTCGACCCGCTGGCCGGCGTCAAGAAGAAAACCGGCAAGGCCAAGCCGACCTACACCGACGTGTTCGGCGACTGGTTGTGCGACCAGGCCGCCGCCGACCCGCGCCTGCTCGGCATCACCCCGGCGATGCGCGAGGGTTCGGGCCTGGTGCGTTTCTCCAGGGAATACCCCGCGCGCTATTTCGACGTGGCGATCGCCGAGCAGCACGCGGTGACACTGGCCGCGGGCATGGCGTGCGAGGGAGCCAAACCCGTGGTGGCGATCTACTCCACCTTCCTGCAGCGTGCCTACGATCAGGCGATCCACGACGTGGCGCTGCAGAACCTCGACGTCACCTTCGCCATCGACCGCGCCGGCGTGGTCGGCCCGGACGGCGCCACCCACTCGGGCAGCTTCGACCTCACCTACCTGCGCTGCCTGCCGAATTTCGTGATCATGGCGCCGGCCGACGAGAACGAGTGCCGCATGATGCTCAGCACCGGCTTCAGCCACCCCGGCCCGGCGGCCATCCGCTACCCGCGCGGCACCGGCCCCGGCGTGGCGACCCACCACGAGCTGGAAACGCTGCCGATCGGCAAGGCCGAGCTGCGCCGGCGCGGCCACGGCCTCGCCCTGCTCAGCTTCGGCGCGATGCTGGCACCGGCCGCCACCATCGCCGCCGAACTCGACGCCACCCTGGTCAACATGCGCTTCATCAAGCCGCTTGACGACACCCTGATCCTGGAACTGGCCAGGACCCACGACGGCTTCGTCACCCTCGAGGACAACGCCGTCGCCGGCGGCGCCGGCTCCGCCGTGGCCGAGTGCCTGGCCGCGCATGGCATCACCCTGCCGATCCTTCATCTCGGCCTTCCAGACGTCTATCTGGAACACGGCAGCCGCGAGGAGGTGCTGAGCATGGCCGGCCTCGACCTGCCGGGCATCCGCCATGCCATCCACGCACGATTTCCGTTGATCGAGCGGCTCAGCCAGAACAGCGCCTGA
PROTEIN sequence
Length: 630
MNDLSHYPRLASIDAPADLRRLPDSELPQVADELRQYLIEAVASSGGHFGAGLGVVELTVALHHEFDTPHDRLVWDVGHQCYPHKILTGRRDRITTIKKKDGLAPFPRREESEYDTFGVGHSSTSISAALGMAIAAQASGEQRKVVAVIGDGAMTAGLAFEALNHAGDVEPDLLVVFNDNGMSISENVGALTKMMARAMASRRLNDLRERAKRAIPKQSFMGRWFKRWEEHAKGMFVPSTLFEELGFHYTGPIDGHNIPQLLQALRTVKNLPGPQLLHVITTKGKGYAPAEQAQIEYHAVGPFDPLAGVKKKTGKAKPTYTDVFGDWLCDQAAADPRLLGITPAMREGSGLVRFSREYPARYFDVAIAEQHAVTLAAGMACEGAKPVVAIYSTFLQRAYDQAIHDVALQNLDVTFAIDRAGVVGPDGATHSGSFDLTYLRCLPNFVIMAPADENECRMMLSTGFSHPGPAAIRYPRGTGPGVATHHELETLPIGKAELRRRGHGLALLSFGAMLAPAATIAAELDATLVNMRFIKPLDDTLILELARTHDGFVTLEDNAVAGGAGSAVAECLAAHGITLPILHLGLPDVYLEHGSREEVLSMAGLDLPGIRHAIHARFPLIERLSQNSA*