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scnpilot_solids2_trim150_scaffold_2784

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2784_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1549
DNA (1548bp) protein (516aa)
Aminopeptidase N n=1 Tax=Rhodanobacter denitrificans RepID=M4NBD7_9GAMM
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:AGG87909.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2784_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2138..6124
DNA (3987bp) protein (1329aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSM6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02468.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2784_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6117..6944
DNA (828bp) protein (276aa)
(protein release factor)-glutamine N5-methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacte
Release factor glutamine methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKK7_9GAMM
scnpilot_solids2_trim150_scaffold_2784_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7138..7413)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKU3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2784_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7627..7956)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYB4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92205.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_2784_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8256..10145)
DNA (1890bp) protein (630aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJM1_9GAMM
scnpilot_solids2_trim150_scaffold_2784_7
unknown

Not on your lists

comp(10138..10755)
DNA (618bp) protein (206aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2784_8
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10960..11565)
DNA (606bp) protein (202aa)
Restriction endonuclease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7L6_9GAMM
restriction endonuclease
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_2784_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11861..12517
DNA (657bp) protein (219aa)
SapC protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7L5_9GAMM
SapC protein {ECO:0000313|EMBL:EIL95456.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SapC
scnpilot_solids2_trim150_scaffold_2784_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12585..13058)
DNA (474bp) protein (158aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL2_9GAMM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGG90298.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2784_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13174..14613
DNA (1440bp) protein (480aa)
Ribonuclease II n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL3_9GAMM
exoribonuclease R
Exoribonuclease R {ECO:0000313|EMBL:AGG90297.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2784_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14717..15379)
DNA (663bp) protein (221aa)
Putative outer membrane protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WMQ3_9GAMM rbh
Putative outer membrane protein {ECO:0000313|EMBL:EIM00745.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative outer membrane protein
scnpilot_solids2_trim150_scaffold_2784_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15455..16489)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSF8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02400.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2784_14
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16499..16834
DNA (336bp) protein (112aa)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2784_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16987..17985)
DNA (999bp) protein (333aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHA9_9GAMM
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGG90294.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2784_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17955..18695)
DNA (741bp) protein (247aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKL6_9GAMM
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGG90294.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2784_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18718..19209)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSG9_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2784_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19389..19856
DNA (468bp) protein (156aa)
SET domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7K7_9GAMM
SET domain-containing protein {ECO:0000313|EMBL:EIL95448.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SET domain-containing protein
scnpilot_solids2_trim150_scaffold_2784_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19939..20457
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSH2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02414.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative membrane protein/domain protein
scnpilot_solids2_trim150_scaffold_2784_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20458..21138
DNA (681bp) protein (227aa)
RDD domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSH3_9GAMM
RDD domain-containing protein {ECO:0000313|EMBL:EIM02415.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative membrane protein/domain protein
scnpilot_solids2_trim150_scaffold_2784_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21135..22112
DNA (978bp) protein (326aa)
Uncharacterized membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKM2_9GAMM rbh
uncharacterized membrane protein rbh
Uncharacterized membrane protein {ECO:0000313|EMBL:AGG90289.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2784_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22102..23634
DNA (1533bp) protein (511aa)
Uncharacterized protein n=3 Tax=Rhodanobacter denitrificans RepID=M4NKS8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90288.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2784_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23631..24746
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7K2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95443.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2784_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24743..25741
DNA (999bp) protein (333aa)
ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7K1_9GAMM
ATPase {ECO:0000313|EMBL:EIL95442.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
MoxR-like ATPase
scnpilot_solids2_trim150_scaffold_2784_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25741..26427
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ63_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90285.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 25 items

View Taxonomy