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scnpilot_solids2_trim150_scaffold_2617_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 3843..4481

Top 3 Functional Annotations

Value Algorithm Source
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 212.0
  • Bit_score: 399
  • Evalue 2.10e-108
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18 3.2.2.-) similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 209.0
  • Bit_score: 392
  • Evalue 7.70e-107
Endonuclease III n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRB1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 212.0
  • Bit_score: 399
  • Evalue 1.50e-108

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGAAGCGCACCGACGTGGTGGAACTGTTCACGCGCCTGCGCGAACTCGACCCGCATCCGACCACCGAGCTGCTGTACGGCACTCCGTTCGAGTTGCTGGTGGCGGTGGTGCTGTCGGCGCAGGCCACCGACGTTGGCGTGAACAAGGCAACCCGCAAGCTCTTTCCGGTGGCGAACACGCCGCAGGCCATCCTCGACCTCGGCGAGGATGGGCTGAAGCGCTACATCAGCACGATCGGCCTGTTCAACGCCAAGGCCAGGAACGTGATCGCGCTGTGCCGGCTGCTGATCGAGCAGCACGGCGGCGAGGTGCCGCGTACCCGCGAGGCGCTGGAAGCGCTGCCCGGCGTGGGCCGCAAGACCGCCAACGTGGTGCTCAATACCGCCTTCGGCGAGCCGACCATCGCGGTCGACACGCACATCTTCCGCGTCGCCAACCGCACCGGGCTGGCGCCCGGCAAGGACGTGCGCACGGTGGAGGACAAGCTGGTCAAGGTGATCCCGGCCGAGTTCAGGCAGGACGCCCACCACTGGCTGATCCTGCACGGGCGCTACGTGTGCAAGGCGCGCAAGCCGGATTGCCCGCACTGCGTGATCCGCGATCTGTGTCGTTACAAGCACAAGACGCCGGCGGAGTAG
PROTEIN sequence
Length: 213
MKRTDVVELFTRLRELDPHPTTELLYGTPFELLVAVVLSAQATDVGVNKATRKLFPVANTPQAILDLGEDGLKRYISTIGLFNAKARNVIALCRLLIEQHGGEVPRTREALEALPGVGRKTANVVLNTAFGEPTIAVDTHIFRVANRTGLAPGKDVRTVEDKLVKVIPAEFRQDAHHWLILHGRYVCKARKPDCPHCVIRDLCRYKHKTPAE*