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scnpilot_solids2_trim150_scaffold_2617_7

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(4528..5421)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W477_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 296.0
  • Bit_score: 451
  • Evalue 8.10e-124
23S RNA-specific pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 293.0
  • Bit_score: 443
  • Evalue 5.30e-122
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 293.0
  • Bit_score: 452
  • Evalue 5.10e-124

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCCGAACGTTCCCTTCCGTCCTGACCGCGGCGCCAGCACGGTGCACCTGCCGCCAGGGCCCTGGCGAAGCGCGCTCGACGCGCTGTGCGCGCACTTTCCCGCGATCAGTCGTGCGCAATGGCTGGACCGGATCGCGCGGGGCCGCGTGCTGGACGGGGATGGCGTGGCGATCGACGCGCAGGTGCCGTACCGCGCGGGAATGCGCCTCCACTACTACCGCGAGGTGGCGGACGAGGCGGAGATACCGTTCGTCGAGACGGTATTGCACGCGGATGAACACCTGGTGGTGGCGGACAAGCCGCACTTCCTGCCGGTGACTCCGGCCGGAGGTTTTGTCGAGCAGACCCTGCTGCGGCGATTGATCCGCCGGCTCGACAATCCGCAGCTCGTGCCGCTGCACCGGATCGACCGCGCCACCGCCGGACTGGTGCTGTTTTCGGCGAATCCCGCCAGCCGCGCGGCTTATCAGGCCCTGTTTCGCGAGCGGCGCATCGACAAGTGCTACGAGGCGTTCGCCCCGGCCTTGCCGGCAGGGGTTTTTCCGCTCTACCGGCGTACGCGCATCGTGCAGGGAGAGCCGTTCTTCCGCATGGCCGAGGTCGAGGGTGAGCCCAACAGCGAGACGCGCATCGAGGTGATCGAGCGCGGCGACACCGACTGGCGCTATGCGCTGCATCCGATGACCGGGCGCAAGCATCAGTTGCGGGTCCACATGGCGGCGCTCGGTGCGCCGATCCGCAACGACGCGTTCTATCCCGAGCTGACGGAGGCGGCGGCGGACGATCATCGGCGGCCGCTGAAGTTGCTGGCGCGGGAGTTGGCGTTCGTCGATCCGTTGTCGGGCGAACCGCGTCGGTTCCGCAGCAAGTTGACGCTCGACGATGGCGCGTGA
PROTEIN sequence
Length: 298
MPNVPFRPDRGASTVHLPPGPWRSALDALCAHFPAISRAQWLDRIARGRVLDGDGVAIDAQVPYRAGMRLHYYREVADEAEIPFVETVLHADEHLVVADKPHFLPVTPAGGFVEQTLLRRLIRRLDNPQLVPLHRIDRATAGLVLFSANPASRAAYQALFRERRIDKCYEAFAPALPAGVFPLYRRTRIVQGEPFFRMAEVEGEPNSETRIEVIERGDTDWRYALHPMTGRKHQLRVHMAALGAPIRNDAFYPELTEAAADDHRRPLKLLARELAFVDPLSGEPRRFRSKLTLDDGA*