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scnpilot_solids2_trim150_scaffold_4028_8

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 4418..5767

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WR03_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 454.0
  • Bit_score: 757
  • Evalue 6.10e-216
RNA polymerase, sigma 54 subunit, RpoN/SigL similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 454.0
  • Bit_score: 757
  • Evalue 1.90e-216
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 454.0
  • Bit_score: 757
  • Evalue 8.60e-216

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGAAACCCGCATTACAGTTTCGCCTCCACCAGCAACTGACCCTGACGCCGCAACTGCAGCAGGCGATTCGCCTGTTGCAGCTGTCGCAGCTGGAGCTGGAAGCCGAACTGCGGCAGATCGCCGAGAGCAACCCGTTGCTGGAGTTTGCCGAGGAGGTCGAGGACGAGGAAACCGAAGGTCTCGACGACGCCGAGAGCAATTTCCAGCTCGCCGACAAGGCGCCCGAGAGCCACAGCGAGAACGATGAAGGCGCCATCGACTGGGCCGACGGCGGCGGCGTGGCGGAGTCGCCGATCGACTTCTCCAGCAACAGTCCCGGCAACGGCAGCGGTTCGCGCGGCGACGAGGATTTCGAGCCGCAGAACGCCGCCCCGGAAACCCTGCAGCAACACCTGACCTGGCAGCTCAACCTGGCCTCGTTCAACCCGCGCGAACACCTGATCGCCACCGTGCTGATCGACGCGCTCAATCCCGCCGGCTACCTGGCCGAGGGGATGGAAGCGGTGCTCGCCGCGCTGCCAGCCGGCTTCGACGCCAGCGTGGAGGAAGTGGAGGCGGTGCGTCGCCGGCTGCAGGGCTTCGACCCGGCCGGCGTCGGCAGCCTGGACCTGCGCGACTGCCTGCGCGTGCAACTGGAGCAATTCGACCCCGACACCCCGCATCGCAGCCTGGCGCTGCGCATCGTCGACAGCGAGCTGGAATTGCTGGCGCGCAACGACATCGTGCGACTGGCGCGGCGCCTGCATGCCACGCCCGACGACGTGGCCGAGGCCGCCGTATTGATCCGCAGCCTGGACCCGCGCCCCGGCGCGGCGCTGGACGCCACCCCGGTCGAGTACGTGGCGCCGGACGCCTATGCGATCCGCGACGGCATGCGCTGGCGGGTCAGCCTCAACCCCGATTCGCAGCCTCGGCTGGGCCTGAACCAGCACTACTGCGGCCTGATCGCCAAGGCCCGCGGCGAGGATGCCAGCTGGATGCGCGGCCAGCTGCAGGAGGCGCGCTGGCTGATCAAGAGCCTGGAATCGCGCGCCGAAACCCTGCTCAAGGTGGCCGAGGCGATCGTGCGCCGGCAAAGCGCCTTCCTCGACTACGGCCCGGAGGCGATGCATCCGCTGGTGCTGCGCGAGGTGGCCGAGGAGGTGGGCATGCACGAATCCACCATCTCGCGGGTCACCACGCGCAAATACCTGCACACGCCGCGCGGCACCTTCGAGCTGAAGTATTTTTTTTCCAGCGGCGTCTCCACGGAGGATGGCGGCAGCGCCTCGGCCACCGCGATCCAGGCCATGCTGCGCAAGCTCATCGACGCGGAGAATCCGCGCAAGCCGCTGTCCGACCAGGCCATC
PROTEIN sequence
Length: 450
MKPALQFRLHQQLTLTPQLQQAIRLLQLSQLELEAELRQIAESNPLLEFAEEVEDEETEGLDDAESNFQLADKAPESHSENDEGAIDWADGGGVAESPIDFSSNSPGNGSGSRGDEDFEPQNAAPETLQQHLTWQLNLASFNPREHLIATVLIDALNPAGYLAEGMEAVLAALPAGFDASVEEVEAVRRRLQGFDPAGVGSLDLRDCLRVQLEQFDPDTPHRSLALRIVDSELELLARNDIVRLARRLHATPDDVAEAAVLIRSLDPRPGAALDATPVEYVAPDAYAIRDGMRWRVSLNPDSQPRLGLNQHYCGLIAKARGEDASWMRGQLQEARWLIKSLESRAETLLKVAEAIVRRQSAFLDYGPEAMHPLVLREVAEEVGMHESTISRVTTRKYLHTPRGTFELKYFFSSGVSTEDGGSASATAIQAMLRKLIDAENPRKPLSDQAI