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scnpilot_solids2_trim150_scaffold_4347_8

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(4333..5097)

Top 3 Functional Annotations

Value Algorithm Source
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 254.0
  • Bit_score: 465
  • Evalue 1.10e-128
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 254.0
  • Bit_score: 463
  • Evalue 1.90e-127
Ribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NGE8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 254.0
  • Bit_score: 463
  • Evalue 1.30e-127

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGGCCGTGCATTGCTCGCAGCGTGAGCGTCGTGCCGAGGAGGCCGAGCGCGACGTGGACGAGCGCTTCAAGTGCGCGTGGATGGAGAAGCACATCGGCAGCGAGTTCGACGGCGTGGTCACCGGGGTCACCTCGTTCGGCCTGTTCGTGGAGCTGGACGAATCGAAGGTTTCCGGCCTGGTGCACATCAGCCAGCTGGTGAACGACTACTACCACTTCGACGCGGTGCGCAAGCTGCTCAAGGGTGAGCGCACCGGCGCGCAGTTCCGCCTCGGCGACCACGTGCGCATCCAGGTGCTGCGCGCCAGCCTGGAGGATCGCAAGATCGACTTCCGCCTGGTCTCGCCGCGCACGTCGGCCCCGGCCCCAGCCCCGACCGGCAGCGGCAAGGCGTATGACTATGCCGCCGCGGGCGAGCGCTATTCGCTGCCGAAGAAGGCGGCCGCCACGACCAAGGCACCGGGCATGTTCGGTCGCGCCGCCAAGGCGATCGGCCGCGCATTCGGCCGCAAGGAGGCCGAGGTTGCCACACCGGCGCCGGCCCCGCGCAAGGCTGCGGCGAGCGATAGTCCGCCGCCGCGTGCACAGCCGCCGGCAGGGCGCCAGCATGCCGGCGGCCAGCATCAGGGCCGCAGGGTCGAACCGTCGTCCGATCGTCGCCCGCGCAAGGACGGTTCCGCCAGGCGCGCGCCGGCCCCGGCTGCCGTCCCGCCGGCGCCGAAGAAGCACGGCGGCCGCAAACCGAAACCGAAAGGCAAGCCATGA
PROTEIN sequence
Length: 255
MAVHCSQRERRAEEAERDVDERFKCAWMEKHIGSEFDGVVTGVTSFGLFVELDESKVSGLVHISQLVNDYYHFDAVRKLLKGERTGAQFRLGDHVRIQVLRASLEDRKIDFRLVSPRTSAPAPAPTGSGKAYDYAAAGERYSLPKKAAATTKAPGMFGRAAKAIGRAFGRKEAEVATPAPAPRKAAASDSPPPRAQPPAGRQHAGGQHQGRRVEPSSDRRPRKDGSARRAPAPAAVPPAPKKHGGRKPKPKGKP*