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scnpilot_solids2_trim150_scaffold_4347

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4347_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..265
DNA (264bp) protein (88aa)
GTP-binding protein TypA/BipA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB63_9GAMM
GTP-binding protein TypA/BipA
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:EIL96704.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_4347_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(470..1366)
DNA (897bp) protein (299aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6L0_9GAMM
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:EIL95101.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
scnpilot_solids2_trim150_scaffold_4347_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1473..1925)
DNA (453bp) protein (151aa)
Low molecular weight heat shock protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W992_9GAMM
Low molecular weight heat shock protein {ECO:0000313|EMBL:EIL96033.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
molecular chaperone (small heat shock protein)
scnpilot_solids2_trim150_scaffold_4347_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2058..2564
DNA (507bp) protein (169aa)
Peroxiredoxin oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6K8_9GAMM
peroxiredoxin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4347_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2577..3266
DNA (690bp) protein (230aa)
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051955};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNAse T (EC:3.1.13.-)
Ribonuclease T n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWQ7_9GAMM
scnpilot_solids2_trim150_scaffold_4347_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3312..3593)
DNA (282bp) protein (94aa)
Permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8J5_9GAMM
Permease {ECO:0000313|EMBL:EIL95786.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4347_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3590..4336)
DNA (747bp) protein (249aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
23S rRNA Gm-2251 2'-O-methyltransferase (EC:2.1.1.-)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIR0_9GAMM
scnpilot_solids2_trim150_scaffold_4347_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4333..5097)
DNA (765bp) protein (255aa)
RNAse R (EC:3.1.-.-)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NGE8_9GAMM
scnpilot_solids2_trim150_scaffold_4347_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5072..7015)
DNA (1944bp) protein (648aa)
RNAse R (EC:3.1.-.-)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NGE8_9GAMM
scnpilot_solids2_trim150_scaffold_4347_trna_1
unknown

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7150..7233
DNA (84bp)
transferRNA Leu
scnpilot_solids2_trim150_scaffold_4347_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7385..7792)
DNA (408bp) protein (136aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY25_9GAMM
lactoylglutathione lyase-like lyase
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:AGG88730.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4347_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8120..8596
DNA (477bp) protein (159aa)
glycine dehydrogenase, decarboxylating (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWR7_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 12 items

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