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scnpilot_solids2_trim150_scaffold_6747_13

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(8815..10644)

Top 3 Functional Annotations

Value Algorithm Source
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 612.0
  • Bit_score: 1171
  • Evalue 0.0
Phosphomethylpyrimidine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 612.0
  • Bit_score: 1171
  • Evalue 0.0
  • rbh
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 616.0
  • Bit_score: 990
  • Evalue 2.40e-286
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1830
ATGAACCATCCCGCCGCTGCCACCGCACCCTCGACGGTTACCACCGGCCCGATCCGCGGCTCGCGCAAGGTCTACGTCAGCCCGCCCGGGCATCCGTCGCTGCGCGTGCCGATGCGCGAGATCGCGCTGAAGGACCCGGTGACGCCGGCGCTGCACGTCTACGATCCGTCCGGACCCTACACCGACGACGACGCACGGATCGATCTCGCCGCGGGCCTGCCGCCGGTGCGCGACGCGTGGATCGAGGCGCGCGGCTTTCCGGCCATCGAAGGACGCGCCGCCCGCCCGGAGGACAACGGCGGGGTCGGCGCGGAACGGCTGGTGGCGCCGTGTCCCGCGCAACGTACGCTGCGCATGGGCGAAGCCGGCCAGCCGGTGACCCAGCTGGAATTCGCCCGCGCCGGCATCATCACCGAGGAAATGATCTACGCCGCCCAGCGCGAGAACCTGGGGCGCGCGCAGATGCATGAAGATGCCGCCGCCCGGCTGGCCGATGGCGAGGCGTTCGGCGCAGCCCTGCCCGCCTTTGTCACGCCCGAATTCGTGCGCAGCGAAATCGCGTCGGGGCGCGCCATCATCCCGGCCAACATCAACCACGGCGAGCTGGAGCCGATGGTGATCGGGCGCAACTTCCTGGTGAAGGTCAACGCGAACATCGGCAATTCGGCGGTGTCTTCCGGCGTGGCCGAGGAGGTCGAGAAACTGGTGTGGGCGATCCGCTGGGGCGCGGACACCCTCATGGATCTGTCCACCGGCCGCAACATCCACAACATCCGCTCTTGGATCATCCGCAACTCGCCGGTGCCGATCGGCACCGTGCCGATCTACCAGGCGCTGGAAAAAGTCGGCGGCGATCCGGCGCGGCTGAGCTGGGAAGTCTTCCGCGACACCCTGATCGAGCAGGCCGAGCAGGGCGTGGACTATTTCACCATCCACGCCGGCGTGCGCCTGCACCACGTGCCGCTGACCGCACGGCGGGTCACCGGCATCGTCTCGCGCGGCGGCTCGATCATGGCGCGCTGGTGCCTCAGCCACCACCGCGAGAGTTTCCTGTACGAGCACTTCTGCCAGATCATGCGCCGCTACGACGTCGCCTTCTCGCTGGGCGACGGCCTGCGCCCCGGCTCGATCGCCGACGCCAACGACGCGGCCCAGTTCGCCGAACTCGAAACCCTGGGCGAGCTGACGAAGATCGCGTGGGCGCACGGCTGCCAGGTGATGATCGAAGGGCCCGGCCATGTGCCGATGCACAAGATCAAGCTCAACATGGACAAGCAGTTGGAGCACTGCGCCGAGGCGCCGTTCTACACGCTGGGCCCGCTGACCACCGACATCGCACCGGGCTACGACCACATCACCTCGGGCATCGGCGCGGCGATGATCGGCTGGTTCGGCACCGCCATGCTCTGCTACGTCACGCCGAAGGAACATCTCGGCCTGCCGAATCGCGACGACGTCAAGACCGGCGTCATCACCTACAAGATCGCGGCGCACGCCGCCGACCTCGCCAAGGGCCACCCGGCCGCGCAGCGCCGCGACGACGCGCTGTCGCGCGCGCGCTTCGAATTCCGCTGGGAGGACCAGTTCAACCTGTCGCTCGATCCCGACACGGCGCGCGCCTACCACGACGCCACCCTGCCGAAGGAGGCGCACAAGACCGCGCATTTCTGCTCGATGTGCGGGCCGAAATTCTGCTCGATGCAGATCACCCAGGACCTGCGCCGCGAGGTGCGCGCGATGGAGGAGACCGCGCTGCGCGCCGGCATGGACGGCAAGTCGCGCGAGTTCGTCGAGCGCGGCGCCACGCTCTACGTGCCGACCGGGGAGTAG
PROTEIN sequence
Length: 610
MNHPAAATAPSTVTTGPIRGSRKVYVSPPGHPSLRVPMREIALKDPVTPALHVYDPSGPYTDDDARIDLAAGLPPVRDAWIEARGFPAIEGRAARPEDNGGVGAERLVAPCPAQRTLRMGEAGQPVTQLEFARAGIITEEMIYAAQRENLGRAQMHEDAAARLADGEAFGAALPAFVTPEFVRSEIASGRAIIPANINHGELEPMVIGRNFLVKVNANIGNSAVSSGVAEEVEKLVWAIRWGADTLMDLSTGRNIHNIRSWIIRNSPVPIGTVPIYQALEKVGGDPARLSWEVFRDTLIEQAEQGVDYFTIHAGVRLHHVPLTARRVTGIVSRGGSIMARWCLSHHRESFLYEHFCQIMRRYDVAFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWAHGCQVMIEGPGHVPMHKIKLNMDKQLEHCAEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNRDDVKTGVITYKIAAHAADLAKGHPAAQRRDDALSRARFEFRWEDQFNLSLDPDTARAYHDATLPKEAHKTAHFCSMCGPKFCSMQITQDLRREVRAMEETALRAGMDGKSREFVERGATLYVPTGE*