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scnpilot_solids2_trim150_scaffold_6747_14

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 11083..11517

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ24_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 145.0
  • Bit_score: 274
  • Evalue 5.10e-71
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 145.0
  • Bit_score: 274
  • Evalue 7.10e-71
alternative sigma factor RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 145.0
  • Bit_score: 255
  • Evalue 1.00e-65

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGTCCCAAGCCCTGGTGACCGCCAACTTCCCCTTGCCCAGCGTGGTTGGCAGCCTGGATGCCTACATTTCCGCAGTGCATCGCATCCCGGTGCTCAGCGTGGAAGAGGAACAGGCGCTGTCGCGCGATTATCTGCAGCAGGACAACCTGGACGCGGCCAAGAAGCTGGTGATGTCGCACCTGCGTTTCGTGGTGCACGTGGCGCGCGGCTACTCCGGCTACGGCCTGCAGCTTGCCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCAAGCGTTTCGACCCGGACATGGGCGTGCGCCTGGTCAGCTTCGCGGTGCACTGGATTCGCGCCGAGATGCACGAGTTCATCCTGAAGAACTGGCGCATCGTGAAGGTCGCCACCACCAAGGCGCAGCGCAAGCTGTTCTTCAACCTGCGCAAGAGC
PROTEIN sequence
Length: 145
MSQALVTANFPLPSVVGSLDAYISAVHRIPVLSVEEEQALSRDYLQQDNLDAAKKLVMSHLRFVVHVARGYSGYGLQLADLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAEMHEFILKNWRIVKVATTKAQRKLFFNLRKS