ggKbase home page

scnpilot_solids2_trim150_scaffold_5313_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(364..1098)

Top 3 Functional Annotations

Value Algorithm Source
Probable transcriptional regulatory protein UUA_11091 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGT3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 244.0
  • Bit_score: 445
  • Evalue 4.80e-122
Probable transcriptional regulatory protein UUA_11091 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 244.0
  • Bit_score: 445
  • Evalue 6.70e-122
DNA-binding regulatory protein, YebC/PmpR family similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 242.0
  • Bit_score: 436
  • Evalue 5.30e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGGGTAGAGGCCCGTCCATCGAAGGTCGCAAGAACGCCGAGGACGCCAAGCGCGCCAAGGTGTTCACCAAGCTGATCCGCGAGATCACCGTGGCTACCCGCGCGGGCGTCGCGGATCCTGGCGGCAACCCGCGCCTGCGCGCGGCGGTGGACAAGGCGCTGTCGGCCAACATGACCAAGGACACCATCGAGCGCGCGATCAAGCGCGGCTCCGGTGCCGACGGCGGCGCCGACATGCAGGAGCTGCGCTACGAGGGCTACGGCCCGGCCGGCATCGCGCTGATCATCGACTGCTTCACCGACAACCCCACCCGCACCGTGGCCGACGTGCGCTACGCGCTGACCAAGCACGGCGGCAACCTCGGCACCTCCGGTTCGGTGGCATTCCAGTTCACCCGCTGCGGCGAACTGGTGTTCGCCACCGACAACGACGCCAGCGCCGAGGAGTTCGTGCTCGATTCGGCGCTGGAAGCGGGCGCCGACGACGTGATCAACGAGCACGGCGAGAGCATCGTGCTGTGCGCGCCGGAGCACTTCGAGGCGGTGCAGCAGGCCCTGATCGACGCCGGCCTCAACGCCGTGCACGCCGGCGTGGTGATGCGCCCGAACAATCGCGTCGAGGTGCCGGCGGAAGCGCTGGAGCCACTGCTCGACCTGCTCGAGAAGCTCGATGCGCTGGACGACGTGAGCGAGGTCTCGCACAACGCCCTGCTGCCCGCCGGGACGGCCGAATAA
PROTEIN sequence
Length: 245
MGRGPSIEGRKNAEDAKRAKVFTKLIREITVATRAGVADPGGNPRLRAAVDKALSANMTKDTIERAIKRGSGADGGADMQELRYEGYGPAGIALIIDCFTDNPTRTVADVRYALTKHGGNLGTSGSVAFQFTRCGELVFATDNDASAEEFVLDSALEAGADDVINEHGESIVLCAPEHFEAVQQALIDAGLNAVHAGVVMRPNNRVEVPAEALEPLLDLLEKLDALDDVSEVSHNALLPAGTAE*