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scnpilot_solids2_trim150_scaffold_5313

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5313_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..330)
DNA (330bp) protein (110aa)
Holliday junction endonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Rhodanobacter denitrificans RepID=M4NBB0_9GAMM
scnpilot_solids2_trim150_scaffold_5313_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(364..1098)
DNA (735bp) protein (245aa)
Probable transcriptional regulatory protein UUA_11091 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGT3_9GAMM
Probable transcriptional regulatory protein UUA_11091 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA-binding regulatory protein, YebC/PmpR family
scnpilot_solids2_trim150_scaffold_5313_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1138..1836)
DNA (699bp) protein (233aa)
Lysophospholipase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZH8_9GAMM
lysophospholipase
Lysophospholipase {ECO:0000313|EMBL:AGG87877.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_5313_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1886..3553)
DNA (1668bp) protein (556aa)
Aspartyl-tRNA ligase {ECO:0000313|EMBL:EIL96496.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EIL96496.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Aspartate--tRNA ligase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAK5_9GAMM
aspartyl-tRNA synthetase
scnpilot_solids2_trim150_scaffold_5313_5
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3709..4032)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UF43_XANAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBA16915.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
scnpilot_solids2_trim150_scaffold_5313_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4458..5186
DNA (729bp) protein (243aa)
Curli production assembly/transport component CsgG subfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL8_9GAMM
Curli production assembly/transport component CsgG subfamily protein {ECO:0000313|EMBL:EIL92309.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized protein involved in formation of curli polymers
scnpilot_solids2_trim150_scaffold_5313_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5509..7680
DNA (2172bp) protein (724aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C6ABA
Ligand-gated channel {ECO:0000313|EMBL:KGI77025.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
outer membrane cobalamin receptor protein
Displaying 7 items

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