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scnpilot_solids2_trim150_scaffold_3390_7

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 7904..8635

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAP1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 243.0
  • Bit_score: 413
  • Evalue 1.20e-112
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 243.0
  • Bit_score: 413
  • Evalue 1.60e-112
Beta-barrel assembly machine subunit BamD similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 243.0
  • Bit_score: 412
  • Evalue 1.10e-112

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGCCGCTGGAGCCGCTGTACAACCGCTCCCACAGCTTCCTGGAGGCGGGCAATTACTCCGGCGCGGTGCGGGCGTTCCAGCGCCTGATCGCGCGCTTCCCGTCCGGTCCGTACAGCGAGCAGGCCCAGCTTGAGCTGGCCTATGCGCAATACAAGGACAACCAGCCGGACGAGGCATTGTCCACCATCAACCGCTTCATCAAGACCTATCCGGCCAACAAACACGTCGATTATGCCTATTACCTGCGCGGCCTGATCAATTTCGACCGCACCAGCGGCTTCATCGAGCGCTTCACCAAGCGCGCCGGCGGGCTGACTCGCCGCGACCAGGGCTACAACCTGCAGGCGTTCGACGATTTCTCCGAACTGTCGCGGCGCTTCCCCGACAGCGCCTACACCGCCGACGCGCGCCAGCGCATGATCTACCTGCGCAACCTGCTGGCGCAGTACGAGATCAACGTGGCCGAGTTCTACCTGCAGAACAAGGCCTACATCGCGGCGGCCGACCGCTCGCAGTACGTGATCGAGCACTACCAGCAGGCGCCGCAGACCGGCGATGCGCTGGCCATCCTCGCCCGCAGCTACCTGGCGCTGGACCGCAAGGAACTGGCTGCGCAGACCCGCGAAGTGCTGGCGCTGAACTATCCGAACCACCCCTATCTCACCGATCCCAAGTGGCCGCACGCACCCTCGCTGGTGCGCAAGATGATTCCGTTCTCCGGGCATCATTGA
PROTEIN sequence
Length: 244
MPLEPLYNRSHSFLEAGNYSGAVRAFQRLIARFPSGPYSEQAQLELAYAQYKDNQPDEALSTINRFIKTYPANKHVDYAYYLRGLINFDRTSGFIERFTKRAGGLTRRDQGYNLQAFDDFSELSRRFPDSAYTADARQRMIYLRNLLAQYEINVAEFYLQNKAYIAAADRSQYVIEHYQQAPQTGDALAILARSYLALDRKELAAQTREVLALNYPNHPYLTDPKWPHAPSLVRKMIPFSGHH*