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scnpilot_solids2_trim150_scaffold_3390

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3390_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1845)
DNA (1845bp) protein (615aa)
ATP-dependent chaperone ClpB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGS4_9GAMM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
scnpilot_solids2_trim150_scaffold_3390_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2006..2845
DNA (840bp) protein (280aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
trehalose-phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12]
Trehalose-phosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL6_9GAMM
scnpilot_solids2_trim150_scaffold_3390_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2805..4610
DNA (1806bp) protein (602aa)
Glycosyl hydrolase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL5_9GAMM
Glycosyl hydrolase family protein {ECO:0000313|EMBL:EIL92306.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycosyl hydrolase family protein
scnpilot_solids2_trim150_scaffold_3390_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4610..6019
DNA (1410bp) protein (470aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Trehalose-6-phosphate synthase; K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
Trehalose-6-phosphate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL4_9GAMM
scnpilot_solids2_trim150_scaffold_3390_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6010..6759)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYL3_9GAMM
uncharacterized protein, YfiH family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3390_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6834..7808)
DNA (975bp) protein (325aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBA3_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3390_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7904..8635
DNA (732bp) protein (244aa)
Outer membrane protein assembly factor BamD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAP1_9GAMM
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Beta-barrel assembly machine subunit BamD
scnpilot_solids2_trim150_scaffold_3390_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8724..10394)
DNA (1671bp) protein (557aa)
NAD synthetase {ECO:0000313|EMBL:EIL96533.1}; EC=6.3.5.1 {ECO:0000313|EMBL:EIL96533.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAP2_9GAMM
NAD+ synthetase
scnpilot_solids2_trim150_scaffold_3390_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10578..10676)
DNA (99bp) protein (33aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
succinyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAP3_9GAMM
Displaying 9 items

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