ggKbase home page

scnpilot_solids2_trim150_scaffold_3418_7

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(7293..7736)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 147.0
  • Bit_score: 281
  • Evalue 5.90e-73
Ribonuclease H n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPJ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 147.0
  • Bit_score: 281
  • Evalue 4.20e-73
ribonuclease HI similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 147.0
  • Bit_score: 275
  • Evalue 7.30e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGAGTGAAGTGGAAGCATTTACCGACGGCGCCTGCCTCGGCAATCCCGGACCGGGCGGCTGGGCCGCCTTGCTGCGGGCCCCTGGCGGCGAGCGGATGCTGGCCGGCCGGGAGCCCGCCACCACCAACAACCGCATGGAGCTGATGGCGGCGATCGGCGCGCTGGAGGCGCTCAAGCGCCCCTGCGTGGTCACGCTCACTACCGATTCGCGCTACGTCATGCAGGGCATCGAGCAATGGTTGCCGAAGTGGCGCGCCAACGGCTGGCGCACGGCCGACCGCAAGCCGGTCAAGAACCAGGATCTGTGGCAGCGCCTGTCCGATGCGGTGGGTACGCACCAGGTTCGCTGGCAGTGGGTGCGCGGCCACAACGGCCACGCGGAAAACGAGCGTGTCGACCGCGCCGCGCGCGAGCAGGCCGAGTCGATCAGGAGCGGGGCATGA
PROTEIN sequence
Length: 148
MSEVEAFTDGACLGNPGPGGWAALLRAPGGERMLAGREPATTNNRMELMAAIGALEALKRPCVVTLTTDSRYVMQGIEQWLPKWRANGWRTADRKPVKNQDLWQRLSDAVGTHQVRWQWVRGHNGHAENERVDRAAREQAESIRSGA*