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scnpilot_solids2_trim150_scaffold_2995_8

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(4473..5405)

Top 3 Functional Annotations

Value Algorithm Source
geranylgeranyl pyrophosphate synthase (EC:2.5.1.10) similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 300.0
  • Bit_score: 462
  • Evalue 1.50e-127
Farnesyl-diphosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WP82_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 300.0
  • Bit_score: 462
  • Evalue 4.80e-127
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 308.0
  • Bit_score: 475
  • Evalue 7.70e-131

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGCCCCCGACCGCGCCGAACCGTTTGAACCCGAACTCTGAGTCCGCCGAACTCGGCCCTGCCCTGCAGTCGCTGGTTGCCCGCGCCGAGCGCGCGCTGCAACGCTGCCTGCCCCCGGCCGCCCACGCCACCGACCATCTGCGTCGCGCCATGCACTATGCCGTGATGGGCGGCGGCAAGCGGCTGCGCCCGATGCTGGTCTACGCCACCGCGCACGCGCTGGACGAAGACGGTCCGGCACTGGACGCCGCCGCCTGCGCGGTGGAACTGATCCACGCCTACTCGCTGGTGCACGACGACCTGCCCGCCATGGACGACGACGCGCTGCGCCGCGGCCGGCCGACCTGCCACGTGGTGTTCGGCGAGGCGATGGCGATCCTCGCCGGCGACGCGCTGCAGGCGCTGGCGTTCGAGGTGCTCGCCGCCGAAGAGGCCGGTGCCATCGACGCCCGCGTGCGCATCGCGATGCTGCAAACGCTGGGTCGCGCCTGCGGCGCCGACGGCATGGCCGGCGGGCAGGCGCTCGACCTGGCCGCGGTCGGGCGTCCGCTGGAACTGGCCGAACTCGAATACATGCATGGCTGCAAGACCGGCGCGCTGATCCGCGCCTCGGTGCGCCTCGGCGCGCTGGTCGCTGCGGCGGACGACGACGCGCTGCAGGCGCTGGACCGCTACGCCAGCGCCGTCGGGCTGGCTTTCCAGGTGCGCGACGACATCCTGGACGTGGAAGGCGACCCTGAAGTGATCGGCAAGACTGCCGGCAAGGACGCCGCCGCGGTCAAGCCCACCTTCCCCTCGATCATCGGCCTCGACGCCTCGCGCGCACGGCTGGCCGAACTGACCGATGCCGCGCTGGCGGCGATCACGCCGTGGGGCGCGCGCGCCGTGCTGCTGCAAGAGCTGGCCCGCTACGCGGCGCATCGCACGCGTTGA
PROTEIN sequence
Length: 311
MPPTAPNRLNPNSESAELGPALQSLVARAERALQRCLPPAAHATDHLRRAMHYAVMGGGKRLRPMLVYATAHALDEDGPALDAAACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDALQALAFEVLAAEEAGAIDARVRIAMLQTLGRACGADGMAGGQALDLAAVGRPLELAELEYMHGCKTGALIRASVRLGALVAAADDDALQALDRYASAVGLAFQVRDDILDVEGDPEVIGKTAGKDAAAVKPTFPSIIGLDASRARLAELTDAALAAITPWGARAVLLQELARYAAHRTR*