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scnpilot_solids2_trim150_scaffold_2995

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2995_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..685
DNA (684bp) protein (228aa)
Putative Rossmann fold nucleotide-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0F7_9GAMM
Putative Rossmann fold nucleotide-binding protein {ECO:0000313|EMBL:EIL92948.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative Rossmann fold nucleotide-binding protein
scnpilot_solids2_trim150_scaffold_2995_trna_1
unknown

Not on your lists

754..827
DNA (74bp)
transferRNA Asn
scnpilot_solids2_trim150_scaffold_2995_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(930..1502)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000368A5EC
Uncharacterized protein {ECO:0000313|EMBL:GAN45144.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2995_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1663..1884)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WP78_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88172.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2995_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1841..2122)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKH9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87720.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2995_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2119..2415)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WP79_9GAMM
Protein of unknown function (DUF1653)
Uncharacterized protein {ECO:0000313|EMBL:AGG88173.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2995_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2497..3864
DNA (1368bp) protein (456aa)
Putative Zn-dependent protease-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL26_9GAMM
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:EIM00168.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
microcin-processing peptidase 1
scnpilot_solids2_trim150_scaffold_2995_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3984..4418
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037EFA0C
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:AHX14234.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2995_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4473..5405)
DNA (933bp) protein (311aa)
geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Farnesyl-diphosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WP82_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2995_9
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5365..5625)
DNA (261bp) protein (87aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WP83_9GAMM
scnpilot_solids2_trim150_scaffold_2995_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5702..7003)
DNA (1302bp) protein (434aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
tRNA(Ile)-lysidine synthase n=2 Tax=Rhodanobacter denitrificans RepID=M4NF19_9GAMM
tRNA(Ile)-lysidine synthetase
scnpilot_solids2_trim150_scaffold_2995_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7000..7734)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNN1_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2995_12
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7802..9016)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NI30_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI77796.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2995_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9092..9718)
DNA (627bp) protein (209aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEK0_9GAMM
acetyl-CoA carboxylase carboxyltransferase subunit alpha
scnpilot_solids2_trim150_scaffold_2995_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9718..10080)
DNA (363bp) protein (121aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEK0_9GAMM
acetyl-CoA carboxylase carboxyltransferase subunit alpha
scnpilot_solids2_trim150_scaffold_2995_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10241..10615
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5A7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94648.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
HNH endonuclease
scnpilot_solids2_trim150_scaffold_2995_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10628..11296)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5A8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94649.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2995_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11349..12656)
DNA (1308bp) protein (436aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA polymerase III subunit alpha n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5A9_9GAMM
DNA-directed DNA polymerase III PolC
Displaying 18 items

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