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scnpilot_solids2_trim150_scaffold_3125_12

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(10330..10788)

Top 3 Functional Annotations

Value Algorithm Source
Small protein A (TmRNA-binding) n=1 Tax=Rhodanobacter denitrificans RepID=I4WXH5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 151.0
  • Bit_score: 246
  • Evalue 1.60e-62
small protein A (tmRNA-binding) similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 151.0
  • Bit_score: 246
  • Evalue 4.90e-63
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 151.0
  • Bit_score: 246
  • Evalue 2.20e-62

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGCAAAAGCTGATCATCCTGCCGGTTGTTGCGCTGCTGGCACTTGCCGTCGCCGGTTGCCACATCGCGTACACGCCGGACGTGCAGCAAGGCAATCCGCTGGACGAAAAGATGGTGGATCAGCTGAAACCGGGGATGACGAAGCACCAGGTCCTTCTGCTGCTCGGCACGCCGTCGGTACGCACGCCGTTCGACAACAGCCGCTGGGACTACGTGTCCACCCAGTCCCGCCGCGGCGGCAAGCCCAAGGTGCGCACGTTCAAGCTGACCTTCAACAACGACACCCTGGTGCACACCGAAGGCGACTTCTTCGCCCGCGACCCGCAGCAGCTGATCAGGGAAAGCCGCAAGTACAACTCGGGTTATCCGGCGAACGAAACCCAGGGCGACAAGAGCCAGTCACCGGATGACAAGAAGAACGACGGCGGCCTGGGCCAGGGGGCCGACGGCGGCCATTGA
PROTEIN sequence
Length: 153
MQKLIILPVVALLALAVAGCHIAYTPDVQQGNPLDEKMVDQLKPGMTKHQVLLLLGTPSVRTPFDNSRWDYVSTQSRRGGKPKVRTFKLTFNNDTLVHTEGDFFARDPQQLIRESRKYNSGYPANETQGDKSQSPDDKKNDGGLGQGADGGH*