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scnpilot_solids2_trim150_scaffold_3191_2

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(283..885)

Top 3 Functional Annotations

Value Algorithm Source
2',5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 194.0
  • Bit_score: 179
  • Evalue 1.30e-42
2',5' RNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTW3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 191.0
  • Bit_score: 245
  • Evalue 5.90e-62
2',5' RNA ligase {ECO:0000313|EMBL:EIL90654.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 191.0
  • Bit_score: 245
  • Evalue 8.30e-62

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
GTGGCGGCACAGACTTCATTTCCCGGCTTTGCACCCGCGGCGGCGACCGACCGGCTGTTCCTTGCGGTGTTCCCCGATCAGGCAACCGTGGCGCGGTTGAGCGCGCTTGCCGCCGAACAATGCACCCGCCACGGGTTGCGCGGCAGGCCGCTGCTGCCGGAGCGTTTCCACATCACCCTGCTGCATCTGGGCGACTGGGCCGGGCTGCCACCGGATGTGGCGCAGGCCACGATGAAGGCGGCAGCGCGGGTGCGGGAAGCGCCTTTCGAAGTGGTGTTCGACCGCGTGGCCAGTTTCGACGGCCGGCGCGACAAGCTGCCGTTCGTGCTGCGCGCCGATGGCGGCAATGCGCCGTTGCGCGCCTTCCAGGCGCAACTTGCCGCGCTGTTGCGCGAGGCGGGCGTGGTGCCGGTCGGGGCCGGTTTCGAGCCGCATGTCACCCTGGCATATGACGCGCGCAAGGTGGCCGCCGAGCCGGTGGCGCCGATCGGCTGGCGCGTCGACGAATTCGTGCTGGTGCACAGCCTGCTGGGCAGGACGCGGCATATCCGGCTCGGCTGCTGGCCGCTGGACTGCGCGCGGGCGGCGCCTGCGGGCGCGTAG
PROTEIN sequence
Length: 201
VAAQTSFPGFAPAAATDRLFLAVFPDQATVARLSALAAEQCTRHGLRGRPLLPERFHITLLHLGDWAGLPPDVAQATMKAAARVREAPFEVVFDRVASFDGRRDKLPFVLRADGGNAPLRAFQAQLAALLREAGVVPVGAGFEPHVTLAYDARKVAAEPVAPIGWRVDEFVLVHSLLGRTRHIRLGCWPLDCARAAPAGA*