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scnpilot_solids2_trim150_scaffold_3191

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3191_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..215)
DNA (213bp) protein (71aa)
D-alanine/D-serine/glycine permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7I6_9GAMM
D-alanine/D-serine/glycine permease {ECO:0000313|EMBL:EIL95427.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
gamma-aminobutyrate permease-like transporter
scnpilot_solids2_trim150_scaffold_3191_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(283..885)
DNA (603bp) protein (201aa)
2',5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
2',5' RNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTW3_9GAMM
2',5' RNA ligase {ECO:0000313|EMBL:EIL90654.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_3191_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(950..1648)
DNA (699bp) protein (233aa)
phosphoglycerate mutase family protein; K15637 serine/threonine-protein phosphatase PGAM5 [EC:3.1.3.16]
Phosphoglycerate mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3L5_9GAMM
Phosphoglycerate mutase {ECO:0000313|EMBL:EIL94056.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_3191_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1747..3201)
DNA (1455bp) protein (485aa)
Amidohydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3N0_9GAMM rbh
Amidohydrolase {ECO:0000313|EMBL:EIL94071.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amidohydrolase, imidazolonepropionase
scnpilot_solids2_trim150_scaffold_3191_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3372..3848
DNA (477bp) protein (159aa)
MarR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WF88_9SPHN
MarR family transcriptional regulator {ECO:0000313|EMBL:ENY82101.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
MarR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_3191_6
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4233..4553)
DNA (321bp) protein (107aa)
Transcriptional regulator, XRE family n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z104_DESAT
XRE family transcriptional regulator; K07726 putative transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADH87264.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
scnpilot_solids2_trim150_scaffold_3191_7
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4546..4881)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037485B7
Uncharacterized protein {ECO:0000313|EMBL:EHQ53377.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3191_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5038..6927)
DNA (1890bp) protein (630aa)
Chaperone protein HtpG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUD7_9GAMM
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
molecular chaperone of HSP90 family
scnpilot_solids2_trim150_scaffold_3191_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7091..7675
DNA (585bp) protein (195aa)
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUD5_9GAMM
glutamyl-queuosine tRNA(Asp) synthetase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3191_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8024..8578
DNA (555bp) protein (185aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.36 1.1.1.100)
Acetoacetyl-CoA reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P0_9GAMM
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:EIL94081.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Displaying 10 items

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