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scnpilot_solids2_trim150_scaffold_3196_6

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(4397..4813)

Top 3 Functional Annotations

Value Algorithm Source
cytidine deaminase (EC:3.5.4.5) similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 139.0
  • Bit_score: 214
  • Evalue 1.90e-53
Cytidine deaminase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKQ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 138.0
  • Bit_score: 222
  • Evalue 3.70e-55
Cytidine deaminase {ECO:0000313|EMBL:EIM00051.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 138.0
  • Bit_score: 222
  • Evalue 5.20e-55

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGCCCGCAAGCCCCCCCGCTCTGGACGAACTGCTCACGCTGGCGCGAGCCGTGCGCGAACACGCCTACGCGCCGTATTCCCGCTTCCACGTGGGTGCCGCGGTACTGACCCGTGACGGCCGGACGTTCGGCGGGTGCAACGTGGAGAACGCCGCCTACGGCCTGTGCAACTGCGCCGAACGCACGGCCCTGTTCAGCGCGGTCGCCGCCGGTTGCCGACCCGGCGATTTCGCTGCCATCGCGGTGGTCGCCGATACCCCGGAGGCGGTCACGCCCTGCGGCGCCTGCCGCCAGGTGATGGCCGAACTGTGTGACGAGGCTACCCCGGTGCTGCTGGCCAACCTCACCGGCGCCACCCGCGAAACCAGCGTGGCCGCGCTGCTGCCCGGCTCGTTCAAGCTGCCGCTGCGAGCTTGA
PROTEIN sequence
Length: 139
MPASPPALDELLTLARAVREHAYAPYSRFHVGAAVLTRDGRTFGGCNVENAAYGLCNCAERTALFSAVAAGCRPGDFAAIAVVADTPEAVTPCGACRQVMAELCDEATPVLLANLTGATRETSVAALLPGSFKLPLRA*