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scnpilot_solids2_trim150_scaffold_3196

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3196_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..823
DNA (822bp) protein (274aa)
gamma-glutamyltransferase 1 (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C4_9GAMM
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:EIL92915.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_3196_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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888..1928
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0C5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92916.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF1625)
scnpilot_solids2_trim150_scaffold_3196_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2084..2680)
DNA (597bp) protein (199aa)
NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYE6_9GAMM
NTP pyrophosphohydrolase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3196_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2749..3669)
DNA (921bp) protein (307aa)
5'-3' exonuclease (Including N-terminal domain of PolI) n=1 Tax=Rhodanobacter denitrificans RepID=M4NJY5_9GAMM
5'-3' exonuclease (including N-terminal domain of PolI)
5'-3' exonuclease (Including N-terminal domain of PolI) {ECO:0000313|EMBL:AGG88086.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3196_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3666..4235)
DNA (570bp) protein (190aa)
Nitroreductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WH68_9GAMM
Nitroreductase {ECO:0000313|EMBL:EIL91033.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nitroreductase
scnpilot_solids2_trim150_scaffold_3196_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4397..4813)
DNA (417bp) protein (139aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKQ9_9GAMM
Cytidine deaminase {ECO:0000313|EMBL:EIM00051.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_3196_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4943..6043
DNA (1101bp) protein (367aa)
NAD/NADP transhydrogenase alpha subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NBV6_9GAMM
NAD/NADP transhydrogenase alpha subunit
NAD/NADP transhydrogenase alpha subunit {ECO:0000313|EMBL:AGG88089.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3196_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6074..6607)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKQ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00049.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF3106)
scnpilot_solids2_trim150_scaffold_3196_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6612..7004)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKQ6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00048.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3196_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7001..7441)
DNA (441bp) protein (147aa)
RNA polymerase factor sigma-70 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUY7_9GAMM
RNA polymerase sigma factor, sigma-70 family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3196_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7747..8064
DNA (318bp) protein (106aa)
Pyruvate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUY6_9GAMM
Pyruvate kinase {ECO:0000313|EMBL:EIL91027.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3196_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8064..8795
DNA (732bp) protein (244aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Rhodanobacter denitrificans RepID=I4WH75_9GAMM
NAD/NADP transhydrogenase beta subunit
Displaying 12 items

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