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scnpilot_solids2_trim150_scaffold_3196_10

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: comp(7001..7441)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUY7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 146.0
  • Bit_score: 277
  • Evalue 6.10e-72
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 146.0
  • Bit_score: 277
  • Evalue 3.20e-72
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 147.0
  • Bit_score: 280
  • Evalue 1.00e-72

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGGACGCGGTGCAGGACGCCATGCTGCGACTGGTACGGCATTATCGCGACAAGCCGGCCGCGGAATGGGCGCCGCTGTTCTGGGGCATCCTGCGTCGACGCATCGTGGACCTGCAGCGCCGGCGCAAGGTGCGCTCGATCGTGGTCGGCTGGCTCGGCGGCGGGCATGACGACGGCGGCGACGAGCTGCCCGTGTGGGAGCCGGCCGACCCGGGCAAGGACCCGCTGGGCCGGCTGCACGACGCGCAGTCGTACGCGGACATGGCCGCGGCGGTGCAGTGCTTGCCCAGGCGTCAGCGCGAGGCGTTCATCCTGCGCATGCTGGAAGGGCTTGACGTGGCGGAGACCGCACGCGCCATGGGCTGCGGCGAAGGCAGCGTGAAAACCCATCTGTCGCGCGCCATGCATCAGCTGCGCGACCAACTGGAGGATTGGCGATGA
PROTEIN sequence
Length: 147
MDAVQDAMLRLVRHYRDKPAAEWAPLFWGILRRRIVDLQRRRKVRSIVVGWLGGGHDDGGDELPVWEPADPGKDPLGRLHDAQSYADMAAAVQCLPRRQREAFILRMLEGLDVAETARAMGCGEGSVKTHLSRAMHQLRDQLEDWR*