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scnpilot_solids2_trim150_scaffold_4462_9

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_151

partial RP 30 / 55 MC: 3 BSCG 33 / 51 MC: 5 ASCG 8 / 38 MC: 1
Location: 9118..9417

Top 3 Functional Annotations

Value Algorithm Source
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015614};; Homogentisate oxygenase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisic acid oxidase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisicase {ECO:0000256|HAMAP-Rule:MF_00334}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 97.0
  • Bit_score: 178
  • Evalue 3.70e-42
Homogentisate 1,2-dioxygenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWJ8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 97.0
  • Bit_score: 178
  • Evalue 2.60e-42
excinuclease ABC subunit C similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 95.0
  • Bit_score: 102
  • Evalue 9.70e-20

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGAATTCACCCTGTACATCCTCGAATGCGCCGACGGCAGTTTCTACATCGGTCATACCGACGATCCGAGCAAACGACTGGCGCAGCATGACGAAGGCAAGGGCAGCGTCCACACCTCAAGCCGGCGCCCACTGAAATTGCTCCACACGGAAGGTTTTGAAACGCGTTACGAAGCCCTGGTCATGGAGCGCAAACTGAAAGGCTGGAGTCGTGCGAAGAAGCTGACGTACATGGCAGGCGATTGGAAAAAGATTGGCGGCTTGGCCAAGGGCAAGCACCGGCATCAACGCTCGCCCTGA
PROTEIN sequence
Length: 100
MEFTLYILECADGSFYIGHTDDPSKRLAQHDEGKGSVHTSSRRPLKLLHTEGFETRYEALVMERKLKGWSRAKKLTYMAGDWKKIGGLAKGKHRHQRSP*