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scnpilot_solids2_trim150_scaffold_3231

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3231_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..172
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX77_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIM02712.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_3231_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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187..783
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX78_9GAMM rbh
putative S-adenosylmethionine-dependent methyltransferase
Putative S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:AGG90584.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3231_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

840..1241
DNA (402bp) protein (134aa)
UPF0225 protein UUA_01469 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTB7_9GAMM
UPF0225 protein UUA_01469 {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3231_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1375..3060)
DNA (1686bp) protein (562aa)
DNA ligase B {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019096}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019091};; Polydeoxyribonucleotide synthase [NAD(+)] B {ECO:0000256|HAMAP-Rule:MF_01587}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA ligase B n=1 Tax=Rhodanobacter denitrificans RepID=I4WX80_9GAMM rbh
NAD-dependent DNA ligase rbh
scnpilot_solids2_trim150_scaffold_3231_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3157..3936)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX81_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90587.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3231_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4131..5354
DNA (1224bp) protein (408aa)
Membrane-bound metallopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NI19_9GAMM rbh
membrane-bound metallopeptidase rbh
Membrane-bound metallopeptidase {ECO:0000313|EMBL:AGG90590.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3231_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5486..6874
DNA (1389bp) protein (463aa)
C-terminal processing peptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTB1_9GAMM
C-terminal processing peptidase {ECO:0000313|EMBL:EIM02703.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
C-terminal processing peptidase rbh
scnpilot_solids2_trim150_scaffold_3231_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6962..7375)
DNA (414bp) protein (138aa)
RNA polymerase sigma factor RpoH n=1 Tax=Rhodanobacter denitrificans RepID=I4WX86_9GAMM
alternative sigma factor RpoH
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3231_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7791..8513)
DNA (723bp) protein (241aa)
Uracil-DNA glycosylase (EC:3.2.2.-) rbh
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Uracil-DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX87_9GAMM rbh
scnpilot_solids2_trim150_scaffold_3231_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8510..9352)
DNA (843bp) protein (281aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WX88_9GAMM
response regulator containing a CheY-like receiver domain and a GGDEF domain
Response regulator containing a CheY-like receiver domain and a GGDEF domain {ECO:0000313|EMBL:AGG90594.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3231_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9492..9986)
DNA (495bp) protein (165aa)
Cell division protein FtsX n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTA7_9GAMM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cell division protein
Displaying 11 items

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