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scnpilot_solids2_trim150_scaffold_3348

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3348_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..411)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIV0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90002.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3348_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(513..1034)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIV0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90002.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3348_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1389..3101)
DNA (1713bp) protein (571aa)
Putative hemolysin n=1 Tax=Rhodanobacter denitrificans RepID=I4WYH5_9GAMM rbh
Putative hemolysin {ECO:0000313|EMBL:AGG90003.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
putative hemolysin rbh
scnpilot_solids2_trim150_scaffold_3348_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3198..3809)
DNA (612bp) protein (204aa)
Multiple antibiotic transporter n=2 Tax=Rhodanobacter denitrificans RepID=M4NGJ6_9GAMM
multiple antibiotic transporter
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3348_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3858..4628)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGF1_9GAMM rbh
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90005.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3348_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4625..4948)
DNA (324bp) protein (108aa)
Glutaredoxin n=1 Tax=Rhodanobacter denitrificans RepID=I4WYH2_9GAMM
monothiol glutaredoxin, Grx4 family
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3348_7
unknown

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comp(5290..5580)
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3348_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5678..6838)
DNA (1161bp) protein (387aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NK22_9GAMM rbh
5-(carboxyamino)imidazole ribonucleotide synthase rbh
scnpilot_solids2_trim150_scaffold_3348_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6835..7338)
DNA (504bp) protein (168aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYG9_9GAMM
5-(carboxyamino)imidazole ribonucleotide mutase
scnpilot_solids2_trim150_scaffold_3348_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7397..7666
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJR3_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3348_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7792..10038
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYG7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90011.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Protein of unknown function (DUF1631) rbh
scnpilot_solids2_trim150_scaffold_3348_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10035..10892
DNA (858bp) protein (286aa)
nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19) rbh
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) {ECO:0000313|EMBL:AGG90012.1}; EC=2.4.2.19 {ECO:0000313|EMBL:AGG90012.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Rhodanobacter denitrificans RepID=M4NIV8_9GAMM rbh
scnpilot_solids2_trim150_scaffold_3348_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10936..11334
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBN6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96877.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Protein of unknown function (DUF3301)
scnpilot_solids2_trim150_scaffold_3348_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11380..11835)
DNA (456bp) protein (152aa)
Stringent starvation protein B n=1 Tax=Rhodanobacter denitrificans RepID=M4NGK4_9GAMM
stringent starvation protein B
Stringent starvation protein B {ECO:0000313|EMBL:AGG90014.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3348_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11822..12460)
DNA (639bp) protein (213aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYG3_9GAMM
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AGG90015.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3348_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12427..13137)
DNA (711bp) protein (237aa)
Ubiquinol-cytochrome c reductase, cytochrome c1 subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBN3_9GAMM
Ubiquinol-cytochrome c reductase, cytochrome c1 subunit {ECO:0000313|EMBL:EIL96874.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cytochrome c1
Displaying 16 items

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