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scnpilot_solids2_trim150_scaffold_3854

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3854_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..237)
DNA (237bp) protein (79aa)
spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGX3_9GAMM
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3854_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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520..2409
DNA (1890bp) protein (630aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
arginine decarboxylase (EC:4.1.1.19) rbh
Biosynthetic arginine decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NTV8_9GAMM rbh
scnpilot_solids2_trim150_scaffold_3854_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2538..3323
DNA (786bp) protein (262aa)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EIL96978.1}; EC=1.1.1.30 {ECO:0000313|EMBL:EIL96978.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3-hydroxybutyrate dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBY7_9GAMM
3-hydroxybutyrate dehydrogenase
scnpilot_solids2_trim150_scaffold_3854_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3370..4122)
DNA (753bp) protein (251aa)
Oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGX0_9GAMM
Oxidoreductase {ECO:0000313|EMBL:EIL96976.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
short-chain alcohol dehydrogenase
scnpilot_solids2_trim150_scaffold_3854_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4154..4834)
DNA (681bp) protein (227aa)
Cell division protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW9_9GAMM
cell division protein
Cell division protein {ECO:0000313|EMBL:AGG90908.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_3854_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4834..6414)
DNA (1581bp) protein (527aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN2_9GAMM
scnpilot_solids2_trim150_scaffold_3854_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6897..7568)
DNA (672bp) protein (224aa)
DNA repair protein radc n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VPN1_9GAMM
DNA repair protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_3854_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7665..8870
DNA (1206bp) protein (402aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5) rbh
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:AGG90905.1}; EC=4.1.1.36 {ECO:0000313|EMBL:AGG90905.1};; EC=6.3.2.5 {ECO:0000313|EMBL:AGG90905.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WGW6_9GAMM rbh
scnpilot_solids2_trim150_scaffold_3854_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8867..9322
DNA (456bp) protein (152aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ28_9GAMM
scnpilot_solids2_trim150_scaffold_3854_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9381..11402
DNA (2022bp) protein (674aa)
Phosphomannomutase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMN8_9GAMM
Phosphomannomutase {ECO:0000313|EMBL:AGG90903.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
phosphomannomutase
Displaying 10 items

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