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scnpilot_solids2_trim150_scaffold_2213

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2213_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1197)
DNA (1197bp) protein (399aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Nuclease-like protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFA7_9GAMM
nuclease-like protein
scnpilot_solids2_trim150_scaffold_2213_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1274..2197)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTG4_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88294.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2213_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2433..3524
DNA (1092bp) protein (364aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54) rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTG5_9GAMM rbh
scnpilot_solids2_trim150_scaffold_2213_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3526..3951)
DNA (426bp) protein (142aa)
OsmC family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTG6_9GAMM
peroxiredoxin, OsmC subfamily
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:AGG88296.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2213_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4097..4375
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTG7_9GAMM
putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:AGG88297.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2213_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4389..5081
DNA (693bp) protein (231aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTG8_9GAMM rbh
hypothetical protein rbh
Putative membrane protein {ECO:0000313|EMBL:AGG88298.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2213_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5172..5501
DNA (330bp) protein (110aa)
Pentapeptide MXKDX repeat protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCD5_9GAMM
pentapeptide MXKDX repeat protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2213_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5594..6661
DNA (1068bp) protein (356aa)
Putative oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ84_9GAMM
Putative oxidoreductase {ECO:0000313|EMBL:EIM01626.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
2-nitropropane dioxygenase-like enzyme rbh
scnpilot_solids2_trim150_scaffold_2213_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6769..7155
DNA (387bp) protein (129aa)
Ribosomal silencing factor RsfS n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ85_9GAMM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
iojap-like ribosome-associated protein
scnpilot_solids2_trim150_scaffold_2213_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7170..7640
DNA (471bp) protein (157aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomon
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Rhodanobacter denitrificans RepID=M4NED8_9GAMM rbh
rRNA large subunit m3Psi methyltransferase RlmH rbh
scnpilot_solids2_trim150_scaffold_2213_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7662..8111
DNA (450bp) protein (150aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFB6_9GAMM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGG88303.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2213_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8117..8692
DNA (576bp) protein (192aa)
Maf-like protein R2APBS1_1149 n=1 Tax=Rhodanobacter denitrificans RepID=M4NCD9_9GAMM rbh
MAF protein rbh
Maf-like protein R2APBS1_1149 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2213_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8676..9467)
DNA (792bp) protein (264aa)
Putative metal-dependent membrane protease n=1 Tax=Rhodanobacter denitrificans RepID=M4NCA3_9GAMM
putative metal-dependent membrane protease
Putative metal-dependent membrane protease {ECO:0000313|EMBL:AGG88305.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2213_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9682..10458
DNA (777bp) protein (259aa)
Putative methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5P7_9GAMM rbh
Putative methyltransferase {ECO:0000313|EMBL:EIL94788.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2213_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10463..10855)
DNA (393bp) protein (131aa)
Membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) n=1 Tax=Rhodanobacter denitrificans RepID=I4WTH7_9GAMM
MAPEG family
MAPEG family {ECO:0000313|EMBL:AGG88306.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2213_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10897..11751
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ91_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01633.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative metalloprotease rbh
scnpilot_solids2_trim150_scaffold_2213_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11918..12304
DNA (387bp) protein (129aa)
Putative Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFC0_9GAMM
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:AGG88308.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2213_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12401..14014)
DNA (1614bp) protein (538aa)
Sulfotransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI1_9GAMM rbh
sulfotransferase family protein rbh
Sulfotransferase family protein {ECO:0000313|EMBL:AGG88310.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2213_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14087..14272)
DNA (186bp) protein (62aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA/RNA helicase, superfamily II (EC:5.99.1.-)
ATP-dependent RNA helicase DeaD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ94_9GAMM
scnpilot_solids2_trim150_scaffold_2213_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14290..14688)
DNA (399bp) protein (133aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA/RNA helicase, superfamily II (EC:5.99.1.-)
ATP-dependent RNA helicase DeaD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5Q2_9GAMM
Displaying 20 items

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