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scnpilot_solids2_trim150_scaffold_2288

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2288_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..547
DNA (546bp) protein (182aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Lipid A biosynthesis lauroyl acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV3_9GAMM
lipid A biosynthesis lauroyl/palmitoleoyl acyltransferase
scnpilot_solids2_trim150_scaffold_2288_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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779..1525
DNA (747bp) protein (249aa)
Polysaccharide deacetylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN4_9GAMM
putative xylanase/chitin deacetylase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2288_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1522..2598
DNA (1077bp) protein (359aa)
Glycosyl transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV5_9GAMM
Glycosyl transferase {ECO:0000313|EMBL:EIL97646.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyltransferase
scnpilot_solids2_trim150_scaffold_2288_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2609..3361)
DNA (753bp) protein (251aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV6_9GAMM rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL97647.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycosyl transferase
scnpilot_solids2_trim150_scaffold_2288_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3351..4682)
DNA (1332bp) protein (444aa)
Lipid A core--O-antigen ligase-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN1_9GAMM rbh
lipid A core-O-antigen ligase-like enyme rbh
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:AGG87533.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2288_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4750..5901)
DNA (1152bp) protein (384aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCN1_9GAMM rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:AGG87532.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2288_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5956..6165)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87531.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2288_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6368..7633
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM8_9GAMM rbh
Na+/proline symporter rbh
Na+/proline symporter {ECO:0000313|EMBL:AGG87530.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2288_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7699..8292)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87529.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2288_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8328..8921)
DNA (594bp) protein (198aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase R2APBS1_0352 {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Putative NADH dehydrogenase/NAD(P)H nitroreductase UUC_16525 n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM6_9GAMM
nitroreductase
scnpilot_solids2_trim150_scaffold_2288_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9056..10042
DNA (987bp) protein (329aa)
Putative nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WHM5_9GAMM rbh
putative nucleoside-diphosphate-sugar epimerase rbh
Putative nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG87527.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2288_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10050..10526)
DNA (477bp) protein (159aa)
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3B8_9GAMM
glutamine synthetase adenylyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 12 items

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