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scnpilot_solids2_trim150_scaffold_2424

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2424_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..735)
DNA (735bp) protein (245aa)
Multifunctional CCA protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX52_9GAMM
tRNA nucleotidyltransferase/poly(A) polymerase
Multifunctional CCA protein {ECO:0000256|HAMAP-Rule:MF_01261, ECO:0000256|SAAS:SAAS00054545}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2424_2
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1093..2238)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0003144158
hypothetical protein
Peptidase M50, membrane-associated zinc metallopeptidase {ECO:0000313|EMBL:AGI25368.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
scnpilot_solids2_trim150_scaffold_2424_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2500..3147)
DNA (648bp) protein (216aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX56_9GAMM rbh
dihydrofolate reductase rbh
Dihydrofolate reductase {ECO:0000313|EMBL:AGG87422.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2424_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3314..4903
DNA (1590bp) protein (530aa)
Tetratricopeptide repeat protein,sulfotransferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAD1_9GAMM rbh
tetratricopeptide repeat protein,sulfotransferase family protein rbh
Tetratricopeptide repeat protein,sulfotransferase family protein {ECO:0000313|EMBL:AGG87425.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2424_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4919..5857)
DNA (939bp) protein (313aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX60_9GAMM rbh
putative nucleoside-diphosphate sugar epimerase rbh
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AGG87426.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2424_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5878..7911)
DNA (2034bp) protein (678aa)
Soluble lytic murein transglycosylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUZ6_9GAMM
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EIM03288.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
soluble lytic murein transglycosylase-like protein rbh
scnpilot_solids2_trim150_scaffold_2424_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8041..9630
DNA (1590bp) protein (530aa)
Exo-beta-1,3-glucanase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDA7_9GAMM
exo-beta-1,3-glucanase
Exo-beta-1,3-glucanase {ECO:0000313|EMBL:AGG87428.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2424_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9544..9957)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAE5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87429.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2424_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9954..10592)
DNA (639bp) protein (213aa)
Metal-dependent hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WCU0_9GAMM
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:AGG87430.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2424_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10762..11412)
DNA (651bp) protein (217aa)
Thiol:disulfide interchange protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WCU1_9GAMM
protein-disulfide isomerase
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2424_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11473..11988)
DNA (516bp) protein (172aa)
Protein-disulfide isomerase (Fragment) n=1 Tax=Rhodanobacter denitrificans RepID=I4WCU2_9GAMM
protein-disulfide isomerase
Protein-disulfide isomerase {ECO:0000313|EMBL:AGG87432.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 11 items

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