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scnpilot_solids2_trim150_scaffold_2449

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2449_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..816)
DNA (816bp) protein (272aa)
Sugar ABC transporter permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUF6_9GAMM
Sugar ABC transporter permease {ECO:0000313|EMBL:EIL90847.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family
scnpilot_solids2_trim150_scaffold_2449_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(813..1340)
DNA (528bp) protein (176aa)
Family 1 extracellular solute-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB7_9GAMM
carbohydrate ABC transporter substrate-binding protein, CUT1 family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2449_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1980..3443)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNB8_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90978.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2449_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3578..6388)
DNA (2811bp) protein (937aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLR1_9GAMM rbh
Outer membrane receptor protein {ECO:0000313|EMBL:AGG90977.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
outer membrane receptor protein rbh
scnpilot_solids2_trim150_scaffold_2449_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6556..7629)
DNA (1074bp) protein (358aa)
LacI family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC0_9GAMM rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:AGG90976.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2449_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7983..8432
DNA (450bp) protein (150aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Rhodanobacter denitrificans RepID=I4WNC1_9GAMM
membrane protease subunit, stomatin/prohibitin
Membrane protease subunit, stomatin/prohibitin {ECO:0000313|EMBL:AGG90975.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2449_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8582..9211
DNA (630bp) protein (210aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC44_9GAMM rbh
scnpilot_solids2_trim150_scaffold_2449_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9221..10576)
DNA (1356bp) protein (452aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Beta-glucosidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC45_9GAMM rbh
beta-galactosidase rbh
scnpilot_solids2_trim150_scaffold_2449_9
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10745..10948)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AJ88_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE55405.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
scnpilot_solids2_trim150_scaffold_2449_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11024..11773
DNA (750bp) protein (250aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NLQ6_9GAMM
carbohydrate ABC transporter ATP-binding protein, CUT1 family
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:AGG90972.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2449_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11851..11946
DNA (96bp) protein (32aa)
Chromosome partitioning protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUG5_9GAMM
ATPase involved in chromosome partitioning
Chromosome partitioning protein {ECO:0000313|EMBL:EIL97038.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 11 items

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