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scnpilot_solids2_trim150_scaffold_2558

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2558_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..478
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLZ7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIM02335.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_2558_2
unknown

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comp(568..1032)
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2558_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1218..1898
DNA (681bp) protein (227aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WS94_9GAMM
scnpilot_solids2_trim150_scaffold_2558_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2057..2632
DNA (576bp) protein (192aa)
Type 11 methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WS96_9GAMM
Type 11 methyltransferase {ECO:0000313|EMBL:EIM02338.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
type 11 methyltransferase
scnpilot_solids2_trim150_scaffold_2558_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3344..5395)
DNA (2052bp) protein (684aa)
Putative metalloendopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKP1_9GAMM
putative metalloendopeptidase
Putative metalloendopeptidase {ECO:0000313|EMBL:AGG90258.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2558_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5485..9234)
DNA (3750bp) protein (1250aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJH6_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90257.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2558_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9447..10400)
DNA (954bp) protein (318aa)
Surface antigen (D15) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSA4_9GAMM
Surface antigen (D15) {ECO:0000313|EMBL:EIM02346.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane protein
Displaying 7 items

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