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scnpilot_solids2_trim150_scaffold_2675

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2675_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..291)
DNA (291bp) protein (97aa)
primary replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQB5_9GAMM
Replicative DNA helicase {ECO:0000313|EMBL:EIM01657.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_2675_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(517..966)
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=1 Tax=Rhodanobacter denitrificans RepID=M4NFE4_9GAMM
LSU ribosomal protein L9P
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1102..1332)
DNA (231bp) protein (77aa)
30S ribosomal protein S18 n=3 Tax=Rhodanobacter RepID=I4WTK3_9GAMM
SSU ribosomal protein S18P
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_2675_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1347..1778)
DNA (432bp) protein (144aa)
30S ribosomal protein S6 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5S0_9GAMM
SSU ribosomal protein S6P
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2675_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2065..2391)
DNA (327bp) protein (109aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WTK1_9GAMM
Iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:AGG88330.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2543..3958
DNA (1416bp) protein (472aa)
asparaginyl-tRNA synthetase (EC:6.1.1.22) rbh
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Asparagine--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=M4NCG1_9GAMM rbh
scnpilot_solids2_trim150_scaffold_2675_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3973..4797
DNA (825bp) protein (275aa)
Maltose operon periplasmic protein (MalM) n=1 Tax=Rhodanobacter denitrificans RepID=I4WTJ9_9GAMM rbh
Maltose operon periplasmic protein precursor (MalM) rbh
Maltose operon periplasmic protein (MalM) {ECO:0000313|EMBL:AGG88328.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4794..5108
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEG0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88327.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5121..5912
DNA (792bp) protein (264aa)
Dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTJ7_9GAMM rbh
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG88326.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6000..6899
DNA (900bp) protein (300aa)
2-aminomuconic semialdehyde dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQA6_9GAMM
2-aminomuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:EIM01648.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD-dependent aldehyde dehydrogenase
scnpilot_solids2_trim150_scaffold_2675_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6883..7407
DNA (525bp) protein (175aa)
2-aminomuconic semialdehyde dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQA6_9GAMM
2-aminomuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:EIM01648.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD-dependent aldehyde dehydrogenase
scnpilot_solids2_trim150_scaffold_2675_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7449..8114
DNA (666bp) protein (222aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Carbonic anhydrase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTJ5_9GAMM rbh
carbonic anhydrase rbh
scnpilot_solids2_trim150_scaffold_2675_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8111..8542
DNA (432bp) protein (144aa)
Endoribonuclease L-PSP n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQA4_9GAMM
putative translation initiation inhibitor, yjgF family
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:AGG88323.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_14
unknown

Not on your lists

comp(8627..8881)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2675_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9070..9849)
DNA (780bp) protein (260aa)
N-formylglutamate amidohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTJ3_9GAMM rbh
N-formylglutamate amidohydrolase rbh
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:AGG88322.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10182..10565
DNA (384bp) protein (128aa)
Putative transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NCF5_9GAMM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGG88319.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10567..11814
DNA (1248bp) protein (416aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFD1_9GAMM rbh
TonB family protein rbh
TonB family protein {ECO:0000313|EMBL:AGG88318.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11885..12460
DNA (576bp) protein (192aa)
Cell wall-associated hydrolase, invasion-associated protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEF0_9GAMM rbh
cell wall-associated hydrolase, invasion-associated protein rbh
Cell wall-associated hydrolase, invasion-associated protein {ECO:0000313|EMBL:AGG88317.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12662..13147)
DNA (486bp) protein (162aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI7_9GAMM rbh
FKBP-type peptidyl-prolyl cis-trans isomerase rbh
scnpilot_solids2_trim150_scaffold_2675_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13201..14433)
DNA (1233bp) protein (411aa)
Arabinose efflux permease family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCB4_9GAMM rbh
arabinose efflux permease family protein rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:AGG88315.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14539..15195
DNA (657bp) protein (219aa)
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI5_9GAMM rbh
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase rbh
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase {ECO:0000313|EMBL:AGG88314.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2675_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15365..15691
DNA (327bp) protein (109aa)
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI4_9GAMM
DNA/RNA helicase, superfamily II
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:AGG88313.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 22 items

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