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scnpilot_solids2_trim150_scaffold_2926

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2926_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..715
DNA (714bp) protein (238aa)
Putative Zn-dependent protease-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ27_9GAMM
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:EIL92468.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
microcin-processing peptidase 2
scnpilot_solids2_trim150_scaffold_2926_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1267..1905
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NK67_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88171.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2926_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1847..2611
DNA (765bp) protein (255aa)
Cytochrome c1 signal peptide protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL30_9GAMM
Cytochrome c1 signal peptide protein {ECO:0000313|EMBL:EIM00172.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2926_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3022..3576)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VM67_9GAMM
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2926_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3606..3866)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WP79_9GAMM
Protein of unknown function (DUF1653)
Uncharacterized protein {ECO:0000313|EMBL:AGG88173.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2926_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3972..5354
DNA (1383bp) protein (461aa)
Microcin-processing peptidase 1 n=1 Tax=Rhodanobacter denitrificans RepID=M4NC33_9GAMM rbh
microcin-processing peptidase 1 rbh
Microcin-processing peptidase 1 {ECO:0000313|EMBL:AGG88174.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2926_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5619..6020
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NBY8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88175.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2926_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6087..6947)
DNA (861bp) protein (287aa)
geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:AGG88176.1}; EC=2.5.1.10 {ECO:0000313|EMBL:AGG88176.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Farnesyl-diphosphate synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WP82_9GAMM
scnpilot_solids2_trim150_scaffold_2926_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6970..7227)
DNA (258bp) protein (86aa)
Exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WP83_9GAMM
scnpilot_solids2_trim150_scaffold_2926_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7303..8604)
DNA (1302bp) protein (434aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
tRNA(Ile)-lysidine synthase n=2 Tax=Rhodanobacter denitrificans RepID=M4NF19_9GAMM rbh
tRNA(Ile)-lysidine synthetase rbh
scnpilot_solids2_trim150_scaffold_2926_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8601..9335)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEK1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97892.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2926_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9440..9838)
DNA (399bp) protein (133aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Rhodanobacter denitrificans RepID=M4NBZ3_9GAMM
acetyl-CoA carboxylase carboxyltransferase subunit alpha
Displaying 12 items

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