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scnpilot_solids2_trim150_scaffold_2972

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2972_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..702)
DNA (702bp) protein (234aa)
Beta-lactamase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSV6_9GAMM
penicillin-binding protein, beta-lactamase class C
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:AGG87767.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2972_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

760..1347
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE41_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87768.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2972_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1394..3277
DNA (1884bp) protein (628aa)
Peptidase M48 Ste24p n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG84_9GAMM rbh
Peptidase M48 Ste24p {ECO:0000313|EMBL:EIL98475.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zn-dependent protease with chaperone function rbh
scnpilot_solids2_trim150_scaffold_2972_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3341..4939)
DNA (1599bp) protein (533aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAZ7_9GAMM rbh
choline dehydrogenase-like flavoprotein rbh
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:AGG87770.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2972_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5058..6323
DNA (1266bp) protein (422aa)
ATP/ADP translocase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSV2_9GAMM rbh
ATP/ADP translocase rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_2972_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6350..6778)
DNA (429bp) protein (143aa)
Signal transduction protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG87_9GAMM
Signal transduction protein {ECO:0000313|EMBL:EIL98478.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative signal-transduction protein containing cAMP-binding and CBS domains
scnpilot_solids2_trim150_scaffold_2972_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6877..7212)
DNA (336bp) protein (112aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodanobacter denitrificans RepID=U3GKL7_9GAMM
monofunctional biosynthetic peptidoglycan transglycosylase
scnpilot_solids2_trim150_scaffold_2972_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7628..8527
DNA (900bp) protein (300aa)
Disulfide bond chaperone n=1 Tax=Rhodanobacter denitrificans RepID=I4WSU9_9GAMM rbh
disulfide bond chaperone rbh
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2972_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8543..11443)
DNA (2901bp) protein (967aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSU8_9GAMM rbh
diguanylate cyclase (GGDEF) domain-containing protein rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGG87775.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2972_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11683..12591
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSU7_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87776.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2972_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12667..13569)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSU6_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87777.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2972_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13587..14042)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE49_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87778.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2972_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14039..14584)
DNA (546bp) protein (182aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WSU4_9GAMM rbh
RNA polymerase sigma factor, sigma-70 family rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG87779.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_2972_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14728..15171)
DNA (444bp) protein (148aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9X1_9GAMM
phosphoenolpyruvate carboxykinase (GTP)
Displaying 14 items

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