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scnpilot_solids2_trim150_scaffold_4016

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4016_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..153
DNA (153bp) protein (51aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR29_9GAMM
scnpilot_solids2_trim150_scaffold_4016_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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203..985
DNA (783bp) protein (261aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Dihydrodipicolinate reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW70_9GAMM
scnpilot_solids2_trim150_scaffold_4016_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(928..1551)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NHV6_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90515.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4016_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1624..2103)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NHV6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90515.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4016_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2100..2678)
DNA (579bp) protein (193aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WW67_9GAMM rbh
RNA polymerase sigma factor, sigma-70 family rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG90514.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4016_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2754..3128
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDY1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97672.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4016_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3186..3812
DNA (627bp) protein (209aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKC1_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4016_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3828..4868)
DNA (1041bp) protein (347aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA polymerase IV n=1 Tax=Rhodanobacter denitrificans RepID=M4NHV2_9GAMM rbh
nucleotidyltransferase/DNA polymerase involved in DNA repair rbh
scnpilot_solids2_trim150_scaffold_4016_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4960..5907)
DNA (948bp) protein (316aa)
Putative integral membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WW63_9GAMM rbh
putative integral membrane protein rbh
Putative integral membrane protein {ECO:0000313|EMBL:AGG90509.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4016_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5910..6815)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLI8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90508.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4016_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7058..7171
DNA (114bp) protein (38aa)
Amino acid transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WW61_9GAMM
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AGG90507.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 11 items

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