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scnpilot_solids2_trim150_scaffold_4152

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4152_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1239)
DNA (1239bp) protein (413aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glucose-6-phosphate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ95_9GAMM
glucose-6-phosphate isomerase
scnpilot_solids2_trim150_scaffold_4152_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1236..2339)
DNA (1104bp) protein (368aa)
transaldolase (EC:2.2.1.2)
Transaldolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NMT8_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4152_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2382..3098)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLM0_9GAMM rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_4152_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3092..4000)
DNA (909bp) protein (303aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NU33_9GAMM
scnpilot_solids2_trim150_scaffold_4152_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4618..5166)
DNA (549bp) protein (183aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAI1_9GAMM rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EIL96472.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acetyltransferase, ribosomal protein N-acetylase rbh
scnpilot_solids2_trim150_scaffold_4152_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5208..5594)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNE2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90954.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4152_7
Bacillus sp. SJS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5848..6285)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YB56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEZ55876.1}; TaxID=1423321 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SJS.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4152_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6441..6971)
DNA (531bp) protein (177aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNE3_9GAMM rbh
IAA acetyltransferase {ECO:0000313|EMBL:EIL96474.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
N-acetyltransferase GCN5
scnpilot_solids2_trim150_scaffold_4152_9
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7032..7475)
DNA (444bp) protein (148aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNE3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KEP24003.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4152_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7536..7967)
DNA (432bp) protein (144aa)
N-acetyltransferase GCN5 n=1 Tax=Rhodanobacter denitrificans RepID=I4WNE4_9GAMM
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EIL96475.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
N-acetyltransferase GCN5
scnpilot_solids2_trim150_scaffold_4152_11
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8765..9355)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Escherichia coli RepID=UPI0003614A7D
Uncharacterized protein {ECO:0000313|EMBL:KJO24112.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
hypothetical protein
Displaying 11 items

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