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scnpilot_solids2_trim150_scaffold_4641

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4641_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..876)
DNA (876bp) protein (292aa)
Lipoprotein releasing system transmembrane protein LolC/E family n=1 Tax=Rhodanobacter denitrificans RepID=I4WWG5_9GAMM
lipoprotein releasing system, transmembrane protein, LolC/E family
Lipoprotein releasing system, transmembrane protein, LolC/E family {ECO:0000313|EMBL:AGG89467.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4641_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1014..1451)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWG6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89468.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4641_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1423..1671)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWG7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89469.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4641_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1775..2113)
DNA (339bp) protein (113aa)
succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WWG8_9GAMM
scnpilot_solids2_trim150_scaffold_4641_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2598..4076)
DNA (1479bp) protein (493aa)
succinate dehydrogenase, flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WWG9_9GAMM
scnpilot_solids2_trim150_scaffold_4641_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4247..4414)
DNA (168bp) protein (56aa)
succinate dehydrogenase subunit D (EC:1.3.5.1)
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:AGG89472.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AGG89472.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPA6_9GAMM
scnpilot_solids2_trim150_scaffold_4641_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4369..4662)
DNA (294bp) protein (98aa)
succinate dehydrogenase subunit D (EC:1.3.5.1)
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:AGG89472.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AGG89472.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH0_9GAMM
scnpilot_solids2_trim150_scaffold_4641_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4659..5054)
DNA (396bp) protein (132aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:AGG89473.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AGG89473.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH1_9GAMM
scnpilot_solids2_trim150_scaffold_4641_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5441..6244
DNA (804bp) protein (268aa)
Folate-binding protein YgfZ n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH3_9GAMM rbh
folate-binding protein YgfZ rbh
Folate-binding protein YgfZ {ECO:0000313|EMBL:AGG89475.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4641_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6719..7153
DNA (435bp) protein (145aa)
Cell Wall Hydrolase n=2 Tax=Rhodanobacter denitrificans RepID=M4NPB3_9GAMM
Cell Wall Hydrolase
Cell Wall Hydrolase {ECO:0000313|EMBL:AGG89476.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4641_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7236..7733)
DNA (498bp) protein (166aa)
Outer membrane lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH5_9GAMM rbh
outer membrane lipoprotein rbh
Outer membrane lipoprotein {ECO:0000313|EMBL:AGG89477.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4641_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7762..8343)
DNA (582bp) protein (194aa)
Putative outer membrane lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH6_9GAMM
putative outer membrane lipoprotein
Putative outer membrane lipoprotein {ECO:0000313|EMBL:AGG89478.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4641_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8501..9205
DNA (705bp) protein (235aa)
Hydrolase, TatD family n=1 Tax=Rhodanobacter denitrificans RepID=M4NF95_9GAMM
hydrolase, TatD family
Hydrolase, TatD family {ECO:0000313|EMBL:AGG89479.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4641_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9286..9810
DNA (525bp) protein (175aa)
MarR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH9_9GAMM rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:AGG89480.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4641_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9822..11303
DNA (1482bp) protein (494aa)
NodT family RND efflux system outer membrane lipoprotein n=2 Tax=Rhodanobacter denitrificans RepID=I4WWI0_9GAMM
efflux transporter, outer membrane factor lipoprotein, NodT family
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:AGG89481.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4641_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11290..12321
DNA (1032bp) protein (344aa)
Efflux pump membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWI1_9GAMM
multidrug resistance efflux pump
Multidrug resistance efflux pump {ECO:0000313|EMBL:AGG89482.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_4641_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12332..12463
DNA (132bp) protein (44aa)
Efflux pump membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W045_9GAMM
Efflux pump membrane protein {ECO:0000313|EMBL:EIL92836.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
multidrug resistance efflux pump
scnpilot_solids2_trim150_scaffold_4641_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12475..12753
DNA (279bp) protein (93aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W046_9GAMM
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:EIL92837.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
drug resistance transporter, EmrB/QacA subfamily
Displaying 18 items

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