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scnpilot_solids2_trim150_scaffold_1314

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1314_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..243
DNA (243bp) protein (81aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPU7_9GAMM
L-sorbosone dehydrogenase {ECO:0000313|EMBL:EIM01489.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
L-sorbosone dehydrogenase
scnpilot_solids2_trim150_scaffold_1314_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(415..2181)
DNA (1767bp) protein (589aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK8_9GAMM rbh
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGG87846.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ABC-type multidrug transport system, ATPase and permease component rbh
scnpilot_solids2_trim150_scaffold_1314_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2416..3027)
DNA (612bp) protein (204aa)
Peroxiredoxin n=2 Tax=Rhodanobacter denitrificans RepID=M4NB53_9GAMM rbh
Peroxiredoxin rbh
Peroxiredoxin {ECO:0000313|EMBL:AGG87845.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3167..4252)
DNA (1086bp) protein (362aa)
Serine kinase of the HPr protein, regulates carbohydrate metabolism n=3 Tax=Rhodanobacter denitrificans RepID=M4NB84_9GAMM rbh
serine kinase of the HPr protein, regulates carbohydrate metabolism rbh
Serine kinase of the HPr protein, regulates carbohydrate metabolism {ECO:0000313|EMBL:AGG87844.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_5
unknown

Not on your lists

4502..5386
DNA (885bp) protein (295aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1314_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5356..5874
DNA (519bp) protein (173aa)
Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEA6_9GAMM
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:AGG87843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5849..7069
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WCQ7_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87842.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7079..8038
DNA (960bp) protein (320aa)
Type 11 methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WCQ8_9GAMM rbh
methylase involved in ubiquinone/menaquinone biosynthesis rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87841.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8014..9144)
DNA (1131bp) protein (377aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB50_9GAMM rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:AGG87840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9141..10268)
DNA (1128bp) protein (376aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT51_9GAMM rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:AGG87839.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10282..11799)
DNA (1518bp) protein (506aa)
Radical SAM protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT52_9GAMM rbh
Fe-S oxidoreductase rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:AGG87838.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_12
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11825..12415)
DNA (591bp) protein (197aa)
biotin synthesis protein; K02169 malonyl-CoA O-methyltransferase [EC:2.1.1.197]
Biotin synthesis protein n=1 Tax=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) RepID=Q5GYI0_XANOR
Biotin synthase {ECO:0000313|EMBL:KHL56158.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
scnpilot_solids2_trim150_scaffold_1314_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12430..13656)
DNA (1227bp) protein (409aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ54_9GAMM rbh
cytosine deaminase-like metal-dependent hydrolase rbh
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:AGG87836.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13661..14545)
DNA (885bp) protein (295aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NB46_9GAMM rbh
methylase involved in ubiquinone/menaquinone biosynthesis rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87835.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14704..15522)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT56_9GAMM rbh
uncharacterized protein involved in exopolysaccharide biosynthesis rbh
Uncharacterized protein involved in exopolysaccharide biosynthesis {ECO:0000313|EMBL:AGG87834.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15533..16702)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT57_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87833.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16699..17628)
DNA (930bp) protein (310aa)
Glycosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND95_9GAMM rbh
glycosyl transferase rbh
Glycosyl transferase {ECO:0000313|EMBL:AGG87832.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17625..18878)
DNA (1254bp) protein (418aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ50_9GAMM rbh
membrane protein involved in the export of O-antigen and teichoic acid rbh
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:AGG87831.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18875..20032)
DNA (1158bp) protein (386aa)
Aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT60_9GAMM rbh
putative PLP-dependent enzyme possibly involved in cell wall biogenesis rbh
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:AGG87830.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20032..20964)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NB73_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87829.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20951..21904)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE94_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87828.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21911..22576)
DNA (666bp) protein (222aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Rhodanobacter denitrificans RepID=I4WT63_9GAMM rbh
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family rbh
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:AGG87827.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22561..22998)
DNA (438bp) protein (146aa)
NDP-hexose isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT64_9GAMM
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme {ECO:0000313|EMBL:AGG87826.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23302..24660
DNA (1359bp) protein (453aa)
Cytochrome C n=1 Tax=Rhodanobacter denitrificans RepID=I4WT65_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87825.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24895..25722
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT66_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87824.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25798..26382
DNA (585bp) protein (195aa)
RNA polymerase sigma-E factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WT67_9GAMM rbh
RNA polymerase sigma factor, sigma-70 family rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG87823.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26379..27014
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT68_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87822.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27011..28315
DNA (1305bp) protein (435aa)
Subtilase family serine protease n=1 Tax=Rhodanobacter denitrificans RepID=I4WT69_9GAMM rbh
subtilisin-like serine protease rbh
Subtilisin-like serine protease {ECO:0000313|EMBL:AGG87821.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1314_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28373..28882)
DNA (510bp) protein (170aa)
Single-stranded DNA-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT70_9GAMM rbh
single stranded DNA-binding protein rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 29 items

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