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scnpilot_solids2_trim150_scaffold_1528

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1528_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1138)
DNA (1137bp) protein (379aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F4_9GAMM
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:EIL93295.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NADH:flavin oxidoreductase
scnpilot_solids2_trim150_scaffold_1528_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1144..2448)
DNA (1305bp) protein (435aa)
Amino acid transporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NBG7_9GAMM rbh
amino acid transporter rbh
Amino acid transporter {ECO:0000313|EMBL:AGG87954.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1528_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2501..3802)
DNA (1302bp) protein (434aa)
Parathion hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ85_9GAMM rbh
Parathion hydrolase {ECO:0000313|EMBL:EIL99526.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
amidohydrolase, imidazolonepropionase rbh
scnpilot_solids2_trim150_scaffold_1528_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3799..4869)
DNA (1071bp) protein (357aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ84_9GAMM rbh
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:EIL99525.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ring-hydroxylating dioxygenase, large terminal subunit rbh
scnpilot_solids2_trim150_scaffold_1528_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4928..6085
DNA (1158bp) protein (386aa)
aminopeptidase n=1 Tax=Dyella ginsengisoli RepID=UPI000346541A rbh
L-aminopeptidase DmpA rbh
L-aminopeptidase DmpA {ECO:0000313|EMBL:AGG87957.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1528_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6097..8133)
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ95_9GAMM rbh
dipeptidyl aminopeptidase/acylaminoacyl peptidase rbh
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:AGG87958.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1528_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8130..10670)
DNA (2541bp) protein (847aa)
Secreted protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ94_9GAMM rbh
periplasmic component of the Tol biopolymer transport system rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1528_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10675..11232)
DNA (558bp) protein (186aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Acetylornithine aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ93_9GAMM
4-aminobutyrate aminotransferase family protein
scnpilot_solids2_trim150_scaffold_1528_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11175..11942)
DNA (768bp) protein (256aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Acetylornithine aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ93_9GAMM rbh
4-aminobutyrate aminotransferase family protein rbh
scnpilot_solids2_trim150_scaffold_1528_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11957..12742)
DNA (786bp) protein (262aa)
Glutaconate CoA transferase subunit B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ79_9GAMM rbh
Glutaconate CoA transferase subunit B {ECO:0000313|EMBL:EIL99520.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit rbh
scnpilot_solids2_trim150_scaffold_1528_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12739..13584)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ78_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99519.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit rbh
scnpilot_solids2_trim150_scaffold_1528_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13587..15170)
DNA (1584bp) protein (528aa)
Aldehyde dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ77_9GAMM rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EIL99518.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD-dependent aldehyde dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_1528_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15180..16559)
DNA (1380bp) protein (460aa)
Class III aminotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ76_9GAMM rbh
Class III aminotransferase {ECO:0000313|EMBL:EIL99517.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
adenosylmethionine-8-amino-7-oxononanoate aminotransferase rbh
scnpilot_solids2_trim150_scaffold_1528_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16604..17422
DNA (819bp) protein (273aa)
IclR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ75_9GAMM rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:EIL99516.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family rbh
scnpilot_solids2_trim150_scaffold_1528_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17415..18617
DNA (1203bp) protein (401aa)
Beta-ketoadipyl CoA thiolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ87_9GAMM rbh
3-oxoadipyl-CoA thiolase rbh
3-oxoadipyl-CoA thiolase {ECO:0000313|EMBL:AGG87966.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1528_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18614..20011
DNA (1398bp) protein (466aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDM7_9GAMM rbh
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase rbh
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:AGG87967.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1528_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20109..22148
DNA (2040bp) protein (680aa)
Sulfotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ72_9GAMM rbh
Sulfotransferase {ECO:0000313|EMBL:EIL99513.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sulfotransferase family protein rbh
scnpilot_solids2_trim150_scaffold_1528_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22177..24666
DNA (2490bp) protein (830aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NBJ2_9GAMM rbh
outer membrane receptor protein rbh
Outer membrane receptor protein {ECO:0000313|EMBL:AGG87969.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1528_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24934..26289
DNA (1356bp) protein (452aa)
RND family efflux transporter, MFP subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NBG2_9GAMM rbh
RND family efflux transporter, MFP subunit rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGG87970.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1528_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26418..26744
DNA (327bp) protein (109aa)
Antimicrobial peptide ABC transporter ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ69_9GAMM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AGG87971.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 20 items

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