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scnpilot_solids2_trim150_scaffold_1867

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1867_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..282)
DNA (282bp) protein (94aa)
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NFN9_9GAMM
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:AGG89740.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

357..746
DNA (390bp) protein (130aa)
Cytochrome C n=1 Tax=Rhodanobacter denitrificans RepID=I4WY76_9GAMM
cytochrome c556
Cytochrome c556 {ECO:0000313|EMBL:AGG89741.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(756..1058)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY75_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89742.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1134..2009)
DNA (876bp) protein (292aa)
Pirin-related protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ77_9GAMM
Pirin-related protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_1867_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2021..3079)
DNA (1059bp) protein (353aa)
NADH:flavin oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFT0_9GAMM rbh
NADH:flavin oxidoreductase rbh
NADH:flavin oxidoreductase {ECO:0000313|EMBL:AGG89744.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3132..4049)
DNA (918bp) protein (306aa)
Putative alpha/beta hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY72_9GAMM rbh
putative alpha/beta hydrolase rbh
Putative alpha/beta hydrolase {ECO:0000313|EMBL:AGG89745.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4134..4343)
DNA (210bp) protein (70aa)
Cold shock protein n=2 Tax=Rhodanobacter RepID=I4WY71_9GAMM
cold shock protein
Cold shock protein {ECO:0000313|EMBL:EIM03068.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_1867_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5083..5541
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY69_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89748.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5566..6801)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFT3_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG89749.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6987..7367
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY67_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89750.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7480..8577
DNA (1098bp) protein (366aa)
Outer membrane phospholipase A n=1 Tax=Rhodanobacter denitrificans RepID=I4WY66_9GAMM rbh
outer membrane phospholipase A rbh
Outer membrane phospholipase A {ECO:0000313|EMBL:AGG89751.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8650..9132)
DNA (483bp) protein (161aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY65_9GAMM rbh
FKBP-type peptidyl-prolyl cis-trans isomerase rbh
scnpilot_solids2_trim150_scaffold_1867_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9227..9712)
DNA (486bp) protein (162aa)
Glutathione peroxidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY64_9GAMM rbh
glutathione peroxidase rbh
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_1867_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9782..10825
DNA (1044bp) protein (348aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DL-methionine transporter ATP-binding subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WY63_9GAMM rbh
ABC-type metal ion transport system, ATPase component rbh
scnpilot_solids2_trim150_scaffold_1867_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10822..11499
DNA (678bp) protein (226aa)
ABC-type metal ion transport system permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q5_9GAMM
ABC-type metal ion transport system permease {ECO:0000313|EMBL:EIL94096.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type metal ion transport system, permease component
scnpilot_solids2_trim150_scaffold_1867_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11566..12363
DNA (798bp) protein (266aa)
Metal ion ABC transporter substrate-binding protein/surface antigen n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUB7_9GAMM rbh
Metal ion ABC transporter substrate-binding protein/surface antigen {ECO:0000313|EMBL:EIM03059.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ABC-type metal ion transport system, periplasmic component/surface antigen rbh
scnpilot_solids2_trim150_scaffold_1867_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12409..13593)
DNA (1185bp) protein (395aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WY60_9GAMM rbh
nicotinate phosphoribosyltransferase rbh
scnpilot_solids2_trim150_scaffold_1867_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13928..14734
DNA (807bp) protein (269aa)
Cytochrome c1 n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ90_9GAMM rbh
cytochrome c1 rbh
Cytochrome c1 {ECO:0000313|EMBL:AGG89758.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14748..15842)
DNA (1095bp) protein (365aa)
Putative aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFU1_9GAMM rbh
putative aminopeptidase rbh
Putative aminopeptidase {ECO:0000313|EMBL:AGG89759.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15864..16292)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFQ5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89760.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16469..16807)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NQ69_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89761.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_1867_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16900..17145)
DNA (246bp) protein (82aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY55_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89762.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 22 items

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