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scnpilot_solids2_trim150_scaffold_2203_13

Organism: SCNPILOT_SOLID2_TRIM150_Rhodanobacter_69_103

partial RP 27 / 55 MC: 1 BSCG 30 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(9961..10728)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 255.0
  • Bit_score: 488
  • Evalue 4.20e-135
tRNA pseudouridine synthase A n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRD9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 255.0
  • Bit_score: 488
  • Evalue 3.00e-135
pseudouridylate synthase I similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 253.0
  • Bit_score: 473
  • Evalue 4.10e-131

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGCGCATTGCCCTGGGCATTGAATACGACGGTACCGATTTCAACGGCTGGCAGCGCCTGAAGACGGACGTCAGCGTGCAGGGCGTGCTGGAGCAGGCGTTGTCGAGAGTCGCCGACCATCCGGTCGAGGTCAGCTGCGCGGGGCGCACCGACGCCGGCGTGCATGGTCGCTGCCAGGTCGTGCACTTCGACACCGAGGCGCGCCGCGACATGCGCGGTTGGGTGCTGGGCGGCTGTTCCAACCTGCCGCCCAGCGTGGCGGTGCTGTGGGCGCAGCCGGTGCCGGACAGTTTCCACGCACGCTACGCGGCGCGCAGCCGGCGCTATCGCTACCGCATCCTCAACCGGCCGGTGCGCGCGGCACTGGATGCGCGCTACGTCACCTGGGAACGCCTGCCGCTGGACACGCAGCGCATGCACGCGGCGGCGCAGGCACTGCTGGGTGAGCACGATTTCAGCGCGTTCCGCGCGCTGTCCTGCCAGGCTGCGCACCCGCGACGCTGCGTGCTGGCGGTGGACGTGCGGCGCGAGGGCGAGCAGGTGTTCGTCGACATCGAGGCGAACGCGTTCCTGCACCACATGGTGCGCAACATCGTCGGTTCGCTGCTGCCGATCGGCCGCGACGAGCAGCCGGTCGAATGGCTGGCCGAGCTGCTGGCCGGCCGCGACCGCCAACTGGCCGGGCCCACCGCGCCGGCCACGGGGCTCACCTTCATCGGCCCGCGCTACGAGCCGTACTGGAACCTGCCGGCCGAGGTGAGCCAGTGA
PROTEIN sequence
Length: 256
MRIALGIEYDGTDFNGWQRLKTDVSVQGVLEQALSRVADHPVEVSCAGRTDAGVHGRCQVVHFDTEARRDMRGWVLGGCSNLPPSVAVLWAQPVPDSFHARYAARSRRYRYRILNRPVRAALDARYVTWERLPLDTQRMHAAAQALLGEHDFSAFRALSCQAAHPRRCVLAVDVRREGEQVFVDIEANAFLHHMVRNIVGSLLPIGRDEQPVEWLAELLAGRDRQLAGPTAPATGLTFIGPRYEPYWNLPAEVSQ*